Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.53□□□□□ -2
RAF1P04049 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.53□□□□□ -2
RAF1P04049 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
RAF1P04049 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
RAF1P04049 MIR892C-201ENST00000516410 77 ntBASIC2.53□□□□□ -2
RAF1P04049 RNU7-30P-201ENST00000516835 62 ntBASIC2.53□□□□□ -2
RAF1P04049 CYCSP27-201ENST00000527643 293 ntBASIC2.53□□□□□ -2
RAF1P04049 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAF1P04049 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.53□□□□□ -2
RAF1P04049 AC026464.5-201ENST00000562497 722 ntBASIC2.53□□□□□ -2
RAF1P04049 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.53□□□□□ -2
RAF1P04049 AC007151.1-201ENST00000572774 483 ntBASIC2.53□□□□□ -2
RAF1P04049 MIR3941-201ENST00000582572 103 ntBASIC2.53□□□□□ -2
RAF1P04049 MIR3942-201ENST00000585264 109 ntBASIC2.53□□□□□ -2
RAF1P04049 AC091135.1-201ENST00000585943 307 ntBASIC2.53□□□□□ -2
RAF1P04049 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAF1P04049 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
RAF1P04049 FAM157A-202ENST00000615155 405 ntBASIC2.53□□□□□ -2
RAF1P04049 Y_RNA.804-201ENST00000615262 101 ntBASIC2.53□□□□□ -2
RAF1P04049 AC063943.3-201ENST00000615562 356 ntBASIC2.53□□□□□ -2
RAF1P04049 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RAF1P04049 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAF1P04049 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAF1P04049 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAF1P04049 Y_RNA.301-201ENST00000364990 103 ntBASIC2.52□□□□□ -2.01
RAF1P04049 MIR592-201ENST00000384959 97 ntBASIC2.52□□□□□ -2.01
RAF1P04049 RNU6-1009P-201ENST00000390996 107 ntBASIC2.52□□□□□ -2.01
RAF1P04049 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.52□□□□□ -2.01
RAF1P04049 AL627311.1-201ENST00000431514 115 ntBASIC2.52□□□□□ -2.01
RAF1P04049 OSTCP8-201ENST00000445117 448 ntBASIC2.52□□□□□ -2.01
RAF1P04049 BTF3P15-201ENST00000455606 336 ntBASIC2.52□□□□□ -2.01
RAF1P04049 TRBV12-1-201ENST00000479785 344 ntBASIC2.52□□□□□ -2.01
RAF1P04049 AC103975.1-201ENST00000482506 483 ntBASIC2.52□□□□□ -2.01
RAF1P04049 RNU6-864P-201ENST00000516256 108 ntBASIC2.52□□□□□ -2.01
RAF1P04049 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.52□□□□□ -2.01
RAF1P04049 LINC00933-203ENST00000559812 219 ntBASIC2.52□□□□□ -2.01
RAF1P04049 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.52□□□□□ -2.01
RAF1P04049 AL645944.1-201ENST00000603857 493 ntBASIC2.52□□□□□ -2.01
RAF1P04049 AL357078.3-201ENST00000607528 618 ntBASIC2.52□□□□□ -2.01
RAF1P04049 AC025253.1-201ENST00000613623 543 ntBASIC2.52□□□□□ -2.01
RAF1P04049 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.52□□□□□ -2.01
RAF1P04049 AC010297.1-201ENST00000623948 149 ntBASIC2.52□□□□□ -2.01
RAF1P04049 AL133216.2-202ENST00000634512 349 ntBASIC2.52□□□□□ -2.01
RAF1P04049 MIR7515-201ENST00000637837 67 ntBASIC2.52□□□□□ -2.01
RAF1P04049 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RAF1P04049 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.52□□□□□ -2.01
RAF1P04049 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RAF1P04049 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RAF1P04049 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.51□□□□□ -2.01
RAF1P04049 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RAF1P04049 AC138393.1-203ENST00000327086 343 ntBASIC2.51□□□□□ -2.01
RAF1P04049 MIR26A1-201ENST00000362205 77 ntBASIC2.51□□□□□ -2.01
RAF1P04049 Y_RNA.142-201ENST00000363491 102 ntBASIC2.51□□□□□ -2.01
RAF1P04049 Y_RNA.324-201ENST00000365165 102 ntBASIC2.51□□□□□ -2.01
RAF1P04049 MIR181A2-201ENST00000384863 110 ntBASIC2.51□□□□□ -2.01
RAF1P04049 MIR10A-201ENST00000385043 110 ntBASIC2.51□□□□□ -2.01
RAF1P04049 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RAF1P04049 MIR450B-201ENST00000401182 78 ntBASIC2.51□□□□□ -2.01
RAF1P04049 AL078595.1-201ENST00000404458 226 ntBASIC2.51□□□□□ -2.01
RAF1P04049 AL356432.1-201ENST00000405809 419 ntBASIC2.51□□□□□ -2.01
RAF1P04049 PGBD4P6-201ENST00000421501 610 ntBASIC2.51□□□□□ -2.01
RAF1P04049 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.51□□□□□ -2.01
RAF1P04049 AL513043.1-201ENST00000439124 535 ntBASIC2.51□□□□□ -2.01
RAF1P04049 MRPL50P4-201ENST00000446432 475 ntBASIC2.51□□□□□ -2.01
RAF1P04049 AC108938.1-201ENST00000451204 136 ntBASIC2.51□□□□□ -2.01
RAF1P04049 NIPA2P5-201ENST00000452282 464 ntBASIC2.51□□□□□ -2.01
RAF1P04049 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.51□□□□□ -2.01
RAF1P04049 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.51□□□□□ -2.01
RAF1P04049 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.51□□□□□ -2.01
RAF1P04049 RPL23AP70-201ENST00000483361 460 ntBASIC2.51□□□□□ -2.01
RAF1P04049 GZMAP1-201ENST00000503054 631 ntBASIC2.51□□□□□ -2.01
RAF1P04049 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.51□□□□□ -2.01
RAF1P04049 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.51□□□□□ -2.01
RAF1P04049 RNU6-1088P-201ENST00000516850 104 ntBASIC2.51□□□□□ -2.01
RAF1P04049 SNORD19.2-201ENST00000516978 73 ntBASIC2.51□□□□□ -2.01
RAF1P04049 HPRT1P3-201ENST00000539521 576 ntBASIC2.51□□□□□ -2.01
RAF1P04049 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.51□□□□□ -2.01
RAF1P04049 AC079600.2-201ENST00000550076 130 ntBASIC2.51□□□□□ -2.01
RAF1P04049 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.51□□□□□ -2.01
RAF1P04049 MIR3672-201ENST00000584290 82 ntBASIC2.51□□□□□ -2.01
RAF1P04049 OR1M4P-201ENST00000589199 287 ntBASIC2.51□□□□□ -2.01
RAF1P04049 APOOP1-201ENST00000604695 592 ntBASIC2.51□□□□□ -2.01
RAF1P04049 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
RAF1P04049 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RAF1P04049 AC026241.1-201ENST00000517873 2142 ntBASIC2.5□□□□□ -2.01
RAF1P04049 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RAF1P04049 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.5□□□□□ -2.01
RAF1P04049 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RAF1P04049 Y_RNA.184-201ENST00000363884 108 ntBASIC2.5□□□□□ -2.01
RAF1P04049 RNU6-1280P-201ENST00000365211 107 ntBASIC2.5□□□□□ -2.01
RAF1P04049 SNORA18.3-201ENST00000384122 132 ntBASIC2.5□□□□□ -2.01
RAF1P04049 RNU2-41P-201ENST00000410991 178 ntBASIC2.5□□□□□ -2.01
RAF1P04049 RNU2-25P-201ENST00000411041 191 ntBASIC2.5□□□□□ -2.01
RAF1P04049 VN1R36P-201ENST00000414936 291 ntBASIC2.5□□□□□ -2.01
RAF1P04049 AL121890.1-201ENST00000435457 205 ntBASIC2.5□□□□□ -2.01
RAF1P04049 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RAF1P04049 PPP1R2P5-201ENST00000457256 603 ntBASIC2.5□□□□□ -2.01
RAF1P04049 AC103851.1-201ENST00000506833 274 ntBASIC2.5□□□□□ -2.01
RAF1P04049 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.5□□□□□ -2.01
RAF1P04049 RNU6-256P-201ENST00000516747 97 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms