Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 VN1R80P-201ENST00000597126 338 ntBASIC2.49□□□□□ -2.01
VTNP04004 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.49□□□□□ -2.01
VTNP04004 Z82195.2-201ENST00000612348 18351 ntBASIC2.49□□□□□ -2.01
VTNP04004 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VTNP04004 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VTNP04004 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VTNP04004 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VTNP04004 SNORD14B-201ENST00000364533 90 ntBASIC2.48□□□□□ -2.01
VTNP04004 RNU6-384P-201ENST00000364900 104 ntBASIC2.48□□□□□ -2.01
VTNP04004 Y_RNA.324-201ENST00000365165 102 ntBASIC2.48□□□□□ -2.01
VTNP04004 RNU6-1280P-201ENST00000365211 107 ntBASIC2.48□□□□□ -2.01
VTNP04004 U8.8-201ENST00000365399 135 ntBASIC2.48□□□□□ -2.01
VTNP04004 SNORA32.2-201ENST00000384049 122 ntBASIC2.48□□□□□ -2.01
VTNP04004 RNU6-876P-201ENST00000391295 104 ntBASIC2.48□□□□□ -2.01
VTNP04004 RNU6-607P-201ENST00000411283 108 ntBASIC2.48□□□□□ -2.01
VTNP04004 CYCSP33-201ENST00000414485 327 ntBASIC2.48□□□□□ -2.01
VTNP04004 ARL5AP1-201ENST00000418991 388 ntBASIC2.48□□□□□ -2.01
VTNP04004 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.48□□□□□ -2.01
VTNP04004 AC092001.1-201ENST00000453012 261 ntBASIC2.48□□□□□ -2.01
VTNP04004 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.48□□□□□ -2.01
VTNP04004 snoU13.15-201ENST00000459407 104 ntBASIC2.48□□□□□ -2.01
VTNP04004 RPL31P58-201ENST00000469001 379 ntBASIC2.48□□□□□ -2.01
VTNP04004 AC026801.1-201ENST00000497178 464 ntBASIC2.48□□□□□ -2.01
VTNP04004 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.48□□□□□ -2.01
VTNP04004 AC025465.4-201ENST00000513422 638 ntBASIC2.48□□□□□ -2.01
VTNP04004 OR11H5P-201ENST00000554039 926 ntBASIC2.48□□□□□ -2.01
VTNP04004 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.48□□□□□ -2.01
VTNP04004 MIR4801-201ENST00000582704 82 ntBASIC2.48□□□□□ -2.01
VTNP04004 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
VTNP04004 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
VTNP04004 MIR3670-3-201ENST00000584855 65 ntBASIC2.48□□□□□ -2.01
VTNP04004 AL121757.2-201ENST00000611223 313 ntBASIC2.48□□□□□ -2.01
VTNP04004 MIR3670-4-201ENST00000612260 65 ntBASIC2.48□□□□□ -2.01
VTNP04004 AC011890.2-201ENST00000613393 294 ntBASIC2.48□□□□□ -2.01
VTNP04004 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.48□□□□□ -2.01
VTNP04004 MIR6766-201ENST00000622641 72 ntBASIC2.48□□□□□ -2.01
VTNP04004 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VTNP04004 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VTNP04004 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VTNP04004 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
VTNP04004 CASC19-280ENST00000642102 1351 ntBASIC2.48□□□□□ -2.01
VTNP04004 RNU6-858P-201ENST00000362436 107 ntBASIC2.47□□□□□ -2.01
VTNP04004 Y_RNA.86-201ENST00000363020 111 ntBASIC2.47□□□□□ -2.01
VTNP04004 RNU6-1252P-201ENST00000363054 104 ntBASIC2.47□□□□□ -2.01
VTNP04004 RNU6-1180P-201ENST00000364935 107 ntBASIC2.47□□□□□ -2.01
VTNP04004 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.47□□□□□ -2.01
VTNP04004 Y_RNA.399-201ENST00000383955 105 ntBASIC2.47□□□□□ -2.01
VTNP04004 MIR627-201ENST00000384979 97 ntBASIC2.47□□□□□ -2.01
VTNP04004 MIR514A2-201ENST00000385131 88 ntBASIC2.47□□□□□ -2.01
VTNP04004 MIR514A3-201ENST00000385132 88 ntBASIC2.47□□□□□ -2.01
VTNP04004 RNU6-750P-201ENST00000390946 107 ntBASIC2.47□□□□□ -2.01
VTNP04004 FO393413.1-201ENST00000402892 195 ntBASIC2.47□□□□□ -2.01
VTNP04004 RN7SKP32-201ENST00000410167 303 ntBASIC2.47□□□□□ -2.01
VTNP04004 AC096649.2-201ENST00000416186 393 ntBASIC2.47□□□□□ -2.01
VTNP04004 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.47□□□□□ -2.01
VTNP04004 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.47□□□□□ -2.01
VTNP04004 HMGN2P10-201ENST00000448085 265 ntBASIC2.47□□□□□ -2.01
VTNP04004 Y_RNA.654-201ENST00000497848 106 ntBASIC2.47□□□□□ -2.01
VTNP04004 RPS27P27-201ENST00000498779 255 ntBASIC2.47□□□□□ -2.01
VTNP04004 AC018710.1-201ENST00000506509 158 ntBASIC2.47□□□□□ -2.01
VTNP04004 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.47□□□□□ -2.01
VTNP04004 AC098799.2-201ENST00000509466 868 ntBASIC2.47□□□□□ -2.01
VTNP04004 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.47□□□□□ -2.01
VTNP04004 SCARNA17.1-201ENST00000516211 143 ntBASIC2.47□□□□□ -2.01
VTNP04004 SCARNA17.2-201ENST00000516334 143 ntBASIC2.47□□□□□ -2.01
VTNP04004 IGKV3-31-201ENST00000523109 329 ntBASIC2.47□□□□□ -2.01
VTNP04004 SNRPGP18-201ENST00000553000 214 ntBASIC2.47□□□□□ -2.01
VTNP04004 AC005261.5-201ENST00000596280 355 ntBASIC2.47□□□□□ -2.01
VTNP04004 AL357078.3-201ENST00000607528 618 ntBASIC2.47□□□□□ -2.01
VTNP04004 AC093913.1-201ENST00000614178 329 ntBASIC2.47□□□□□ -2.01
VTNP04004 SCARNA17.4-201ENST00000614296 143 ntBASIC2.47□□□□□ -2.01
VTNP04004 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.47□□□□□ -2.01
VTNP04004 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.47□□□□□ -2.01
VTNP04004 AC009033.1-201ENST00000624279 431 ntBASIC2.47□□□□□ -2.01
VTNP04004 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
VTNP04004 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.46□□□□□ -2.02
VTNP04004 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
VTNP04004 RNU6-37P-201ENST00000362692 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-266P-201ENST00000364225 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-11P-201ENST00000364234 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 SNORD56.5-201ENST00000364281 72 ntBASIC2.46□□□□□ -2.02
VTNP04004 SNORA68.1-201ENST00000364537 132 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-25P-201ENST00000383873 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-1-201ENST00000383898 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-48P-201ENST00000384161 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-36P-201ENST00000384172 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-4P-201ENST00000384205 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-5P-201ENST00000384238 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-3P-201ENST00000384314 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-16P-201ENST00000384385 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-15P-201ENST00000384534 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-2-201ENST00000384627 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-29P-201ENST00000384637 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-9-201ENST00000384776 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU6-33P-201ENST00000384793 107 ntBASIC2.46□□□□□ -2.02
VTNP04004 RNU2-3P-201ENST00000410144 191 ntBASIC2.46□□□□□ -2.02
VTNP04004 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.46□□□□□ -2.02
VTNP04004 HMGB1P31-201ENST00000437242 427 ntBASIC2.46□□□□□ -2.02
VTNP04004 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms