Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 Y_RNA.414-201ENST00000384011 101 ntBASIC2.79□□□□□ -1.96
LDLRP01130 SNORA75B-201ENST00000384053 137 ntBASIC2.79□□□□□ -1.96
LDLRP01130 RNU6-1127P-201ENST00000384580 107 ntBASIC2.79□□□□□ -1.96
LDLRP01130 SNORD70.1-201ENST00000391007 85 ntBASIC2.79□□□□□ -1.96
LDLRP01130 FO393413.1-201ENST00000402892 195 ntBASIC2.79□□□□□ -1.96
LDLRP01130 RPS4XP7-201ENST00000406274 780 ntBASIC2.79□□□□□ -1.96
LDLRP01130 MIR548K-201ENST00000408406 116 ntBASIC2.79□□□□□ -1.96
LDLRP01130 VN1R36P-201ENST00000414936 291 ntBASIC2.79□□□□□ -1.96
LDLRP01130 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.79□□□□□ -1.96
LDLRP01130 AC022018.1-201ENST00000430685 241 ntBASIC2.79□□□□□ -1.96
LDLRP01130 MTND3P2-201ENST00000438452 342 ntBASIC2.79□□□□□ -1.96
LDLRP01130 AL135938.1-201ENST00000443141 297 ntBASIC2.79□□□□□ -1.96
LDLRP01130 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
LDLRP01130 AL360271.2-201ENST00000447710 161 ntBASIC2.79□□□□□ -1.96
LDLRP01130 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.79□□□□□ -1.96
LDLRP01130 RPS29P26-201ENST00000477483 171 ntBASIC2.79□□□□□ -1.96
LDLRP01130 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.79□□□□□ -1.96
LDLRP01130 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.79□□□□□ -1.96
LDLRP01130 RNU6-1170P-201ENST00000515974 106 ntBASIC2.79□□□□□ -1.96
LDLRP01130 RNU6-237P-201ENST00000515985 71 ntBASIC2.79□□□□□ -1.96
LDLRP01130 RNU6-1046P-201ENST00000516538 107 ntBASIC2.79□□□□□ -1.96
LDLRP01130 MTND4P7-201ENST00000523876 130 ntBASIC2.79□□□□□ -1.96
LDLRP01130 COPS8P3-201ENST00000526024 482 ntBASIC2.79□□□□□ -1.96
LDLRP01130 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LDLRP01130 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.79□□□□□ -1.96
LDLRP01130 APOOP3-201ENST00000536787 586 ntBASIC2.79□□□□□ -1.96
LDLRP01130 HSPE1P20-201ENST00000538133 289 ntBASIC2.79□□□□□ -1.96
LDLRP01130 AC006504.6-201ENST00000590142 199 ntBASIC2.79□□□□□ -1.96
LDLRP01130 AC007938.3-201ENST00000604965 623 ntBASIC2.79□□□□□ -1.96
LDLRP01130 AL022345.1-201ENST00000607292 135 ntBASIC2.79□□□□□ -1.96
LDLRP01130 uc_338.34-201ENST00000617467 174 ntBASIC2.79□□□□□ -1.96
LDLRP01130 AC007318.2-201ENST00000620999 243 ntBASIC2.79□□□□□ -1.96
LDLRP01130 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.79□□□□□ -1.96
LDLRP01130 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LDLRP01130 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LDLRP01130 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
LDLRP01130 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
LDLRP01130 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LDLRP01130 RNU6-1297P-201ENST00000384415 104 ntBASIC2.78□□□□□ -1.96
LDLRP01130 RNU6-45P-201ENST00000384471 107 ntBASIC2.78□□□□□ -1.96
LDLRP01130 Y_RNA.530-201ENST00000384587 101 ntBASIC2.78□□□□□ -1.96
LDLRP01130 SNORD67-201ENST00000390833 111 ntBASIC2.78□□□□□ -1.96
LDLRP01130 RNY4P36-201ENST00000391116 96 ntBASIC2.78□□□□□ -1.96
LDLRP01130 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LDLRP01130 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.78□□□□□ -1.96
LDLRP01130 NUP35P1-201ENST00000422734 947 ntBASIC2.78□□□□□ -1.96
LDLRP01130 PMCHL1-202ENST00000423102 261 ntBASIC2.78□□□□□ -1.96
LDLRP01130 AC105272.1-201ENST00000438604 198 ntBASIC2.78□□□□□ -1.96
LDLRP01130 RPL37P4-201ENST00000448908 268 ntBASIC2.78□□□□□ -1.96
LDLRP01130 RPS15AP27-201ENST00000449183 343 ntBASIC2.78□□□□□ -1.96
LDLRP01130 AL583843.1-201ENST00000456070 346 ntBASIC2.78□□□□□ -1.96
LDLRP01130 RNU6-1208P-201ENST00000459588 107 ntBASIC2.78□□□□□ -1.96
LDLRP01130 AC130509.1-201ENST00000464158 433 ntBASIC2.78□□□□□ -1.96
LDLRP01130 RPL7P43-201ENST00000478876 753 ntBASIC2.78□□□□□ -1.96
LDLRP01130 AC090096.1-201ENST00000489168 390 ntBASIC2.78□□□□□ -1.96
LDLRP01130 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.78□□□□□ -1.96
LDLRP01130 RPS27AP10-201ENST00000496103 208 ntBASIC2.78□□□□□ -1.96
LDLRP01130 MTCO1P29-201ENST00000496868 288 ntBASIC2.78□□□□□ -1.96
LDLRP01130 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.78□□□□□ -1.96
LDLRP01130 YWHAEP4-201ENST00000505390 198 ntBASIC2.78□□□□□ -1.96
LDLRP01130 MTND3P25-201ENST00000509243 135 ntBASIC2.78□□□□□ -1.96
LDLRP01130 Y_RNA.682-201ENST00000516457 100 ntBASIC2.78□□□□□ -1.96
LDLRP01130 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.78□□□□□ -1.96
LDLRP01130 AL137161.1-201ENST00000532231 390 ntBASIC2.78□□□□□ -1.96
LDLRP01130 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.78□□□□□ -1.96
LDLRP01130 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LDLRP01130 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.78□□□□□ -1.96
LDLRP01130 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LDLRP01130 AC073539.2-201ENST00000597113 165 ntBASIC2.78□□□□□ -1.96
LDLRP01130 AC008737.2-201ENST00000599446 118 ntBASIC2.78□□□□□ -1.96
LDLRP01130 AC010620.2-201ENST00000600135 313 ntBASIC2.78□□□□□ -1.96
LDLRP01130 AC136443.5-201ENST00000603741 370 ntBASIC2.78□□□□□ -1.96
LDLRP01130 AC080078.3-201ENST00000605407 463 ntBASIC2.78□□□□□ -1.96
LDLRP01130 AC092807.2-201ENST00000609367 243 ntBASIC2.78□□□□□ -1.96
LDLRP01130 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.78□□□□□ -1.96
LDLRP01130 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LDLRP01130 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LDLRP01130 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.78□□□□□ -1.96
LDLRP01130 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LDLRP01130 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.77□□□□□ -1.97
LDLRP01130 AC062016.1-201ENST00000355719 319 ntBASIC2.77□□□□□ -1.97
LDLRP01130 RNU1-35P-201ENST00000362782 153 ntBASIC2.77□□□□□ -1.97
LDLRP01130 Y_RNA.145-201ENST00000363527 102 ntBASIC2.77□□□□□ -1.97
LDLRP01130 Y_RNA.202-201ENST00000364083 110 ntBASIC2.77□□□□□ -1.97
LDLRP01130 SNORA22B-201ENST00000383876 138 ntBASIC2.77□□□□□ -1.97
LDLRP01130 RNU6-393P-201ENST00000384475 107 ntBASIC2.77□□□□□ -1.97
LDLRP01130 MIR181A2-201ENST00000384863 110 ntBASIC2.77□□□□□ -1.97
LDLRP01130 MIR548F5-201ENST00000408421 86 ntBASIC2.77□□□□□ -1.97
LDLRP01130 RPL19P1-201ENST00000411635 428 ntBASIC2.77□□□□□ -1.97
LDLRP01130 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
LDLRP01130 MTCO2P27-201ENST00000420740 428 ntBASIC2.77□□□□□ -1.97
LDLRP01130 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.77□□□□□ -1.97
LDLRP01130 AC098614.2-201ENST00000426040 255 ntBASIC2.77□□□□□ -1.97
LDLRP01130 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.77□□□□□ -1.97
LDLRP01130 AL669831.1-202ENST00000428504 417 ntBASIC2.77□□□□□ -1.97
LDLRP01130 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.77□□□□□ -1.97
LDLRP01130 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.77□□□□□ -1.97
LDLRP01130 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.77□□□□□ -1.97
LDLRP01130 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.77□□□□□ -1.97
LDLRP01130 AC092798.1-201ENST00000458542 409 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms