Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 SNORA17.3-201ENST00000391159 129 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 AF274854.1-201ENST00000413236 615 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 AL031779.1-201ENST00000415663 330 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 C8orf59P1-201ENST00000429930 303 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.32□□□□□ -2.04
PDGFBP01127 AL596276.1-201ENST00000434465 418 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.32□□□□□ -2.04
PDGFBP01127 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.32□□□□□ -2.04
PDGFBP01127 AP000705.1-201ENST00000454567 350 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 RPL38P4-201ENST00000502376 214 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.32□□□□□ -2.04
PDGFBP01127 AC091133.4-201ENST00000511142 308 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 SNORD27.1-201ENST00000516319 72 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 AC092325.1-201ENST00000566449 554 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 MIR5583-1-201ENST00000580941 59 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 MIR3670-2-201ENST00000582974 65 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 MIR3670-1-201ENST00000584160 65 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 MIR3670-3-201ENST00000584855 65 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 MIR3670-4-201ENST00000612260 65 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 AC015540.1-201ENST00000615828 501 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 AC068792.1-201ENST00000621354 417 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
PDGFBP01127 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
PDGFBP01127 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
PDGFBP01127 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.32□□□□□ -2.04
PDGFBP01127 RNU6-1303P-201ENST00000364841 107 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 MIR489-201ENST00000384923 84 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 RNU6-1158P-201ENST00000391167 107 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 CALM2P3-201ENST00000400429 449 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 EEF1A1P40-201ENST00000412883 573 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.31□□□□□ -2.04
PDGFBP01127 MTCO1P21-201ENST00000416634 589 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.31□□□□□ -2.04
PDGFBP01127 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.31□□□□□ -2.04
PDGFBP01127 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.31□□□□□ -2.04
PDGFBP01127 AC012308.1-201ENST00000451232 178 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.31□□□□□ -2.04
PDGFBP01127 AC112771.1-201ENST00000463581 102 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.31□□□□□ -2.04
PDGFBP01127 HMGB1P29-201ENST00000505659 499 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 TBCAP3-201ENST00000512475 312 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 RNA5SP82-201ENST00000516707 92 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 RNU6-685P-201ENST00000517088 95 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.31□□□□□ -2.04
PDGFBP01127 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.31□□□□□ -2.04
PDGFBP01127 PSMA3P-201ENST00000555485 635 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.31□□□□□ -2.04
PDGFBP01127 MIR4703-201ENST00000577728 79 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.31□□□□□ -2.04
PDGFBP01127 AL670379.2-201ENST00000604983 252 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 MIR219B-201ENST00000637023 88 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.31□□□□□ -2.04
PDGFBP01127 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PDGFBP01127 AC131280.1-202ENST00000624067 4211 ntBASIC2.31□□□□□ -2.04
PDGFBP01127 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.31□□□□□ -2.04
PDGFBP01127 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PDGFBP01127 Y_RNA.3-201ENST00000362331 103 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 RNU6-371P-201ENST00000364283 108 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 RNU6-996P-201ENST00000365438 107 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 Y_RNA.466-201ENST00000384294 113 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 SNORD70.1-201ENST00000391007 85 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 MTCO3P40-201ENST00000392516 676 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 Y_RNA.623-201ENST00000411128 95 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.3□□□□□ -2.04
PDGFBP01127 AL360271.2-201ENST00000447710 161 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 NDUFB1P2-201ENST00000449477 176 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 RN7SL297P-201ENST00000483161 293 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 AC011005.2-201ENST00000487324 359 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 MTAPP1-201ENST00000489154 819 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 AC091435.1-201ENST00000505442 584 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 MTCO3P9-201ENST00000506989 781 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 Y_RNA.655-201ENST00000515919 96 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 RNU6-1038P-201ENST00000516516 104 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.3□□□□□ -2.04
PDGFBP01127 MIR5692A1-201ENST00000580523 69 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 MIR5007-201ENST00000583098 95 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.3□□□□□ -2.04
PDGFBP01127 AC073539.2-201ENST00000597113 165 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.3□□□□□ -2.04
PDGFBP01127 AC008121.3-201ENST00000618726 433 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
PDGFBP01127 AC124864.2-201ENST00000624736 186 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 MIR3529-201ENST00000637713 78 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 MTND4P14-201ENST00000435799 1354 ntBASIC2.3□□□□□ -2.04
PDGFBP01127 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDGFBP01127 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDGFBP01127 SNORA3A-201ENST00000364113 130 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 RNU6-45P-201ENST00000384471 107 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 RNU6-606P-201ENST00000384721 111 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 FGF7P8-201ENST00000402994 292 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 U3.37-201ENST00000408528 213 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 SNORA11.4-201ENST00000408823 129 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 RNU6-387P-201ENST00000411331 105 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.29□□□□□ -2.04
PDGFBP01127 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PDGFBP01127 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms