Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC022493.2-201ENST00000506122 481 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 RNU6-586P-201ENST00000517265 104 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 ZNF705CP-201ENST00000530515 889 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR1AO95602 AC141557.1-201ENST00000540982 400 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.01□□□□□ -2.41
POLR1AO95602 AC004067.1-201ENST00000608733 700 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 U6.107-201ENST00000637108 79 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 AC106858.1-201ENST00000637497 429 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 RNU4-73P-201ENST00000363164 141 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 AC063976.4-201ENST00000421971 163 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR1AO95602 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR1AO95602 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR1AO95602 RPS29P8-201ENST00000445109 171 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.01□□□□□ -2.41
POLR1AO95602 RNA5SP503-201ENST00000517047 117 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR1AO95602 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR1AO95602 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR1AO95602 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR1AO95602 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR1AO95602 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 AC097372.5-201ENST00000623665 376 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
POLR1AO95602 RNA5SP493-201ENST00000364115 91 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 RNU6-152P-201ENST00000384037 107 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 RNU6-160P-201ENST00000384591 107 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 RNU6-910P-201ENST00000390844 107 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.02□□□□□ -2.41
POLR1AO95602 AC104651.1-201ENST00000427559 735 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 AL049874.1-201ENST00000489560 388 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 RN7SKP258-201ENST00000517151 304 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC-0.02□□□□□ -2.41
POLR1AO95602 AP003392.2-201ENST00000527269 208 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 MIR5094-201ENST00000578766 85 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.02□□□□□ -2.41
POLR1AO95602 RNU6-91P-201ENST00000607774 107 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 AC107075.1-201ENST00000613695 314 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 AC017104.5-201ENST00000637647 639 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
POLR1AO95602 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
POLR1AO95602 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.02□□□□□ -2.41
POLR1AO95602 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.03□□□□□ -2.41
POLR1AO95602 MIR194-1-201ENST00000384892 85 ntBASIC-0.03□□□□□ -2.41
POLR1AO95602 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
POLR1AO95602 RPS3AP1-201ENST00000413190 320 ntBASIC-0.03□□□□□ -2.41
POLR1AO95602 AL606662.1-201ENST00000445763 553 ntBASIC-0.03□□□□□ -2.41
POLR1AO95602 RNU6-678P-201ENST00000516832 109 ntBASIC-0.03□□□□□ -2.41
POLR1AO95602 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.03□□□□□ -2.41
POLR1AO95602 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.03□□□□□ -2.41
POLR1AO95602 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.03□□□□□ -2.41
POLR1AO95602 Z98751.3-201ENST00000604447 521 ntBASIC-0.03□□□□□ -2.41
POLR1AO95602 AC112220.2-201ENST00000605513 533 ntBASIC-0.03□□□□□ -2.41
POLR1AO95602 AL353765.1-201ENST00000605514 183 ntBASIC-0.03□□□□□ -2.41
POLR1AO95602 AC092106.3-201ENST00000611308 722 ntBASIC-0.03□□□□□ -2.41
POLR1AO95602 AC040896.1-201ENST00000613819 479 ntBASIC-0.03□□□□□ -2.41
POLR1AO95602 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.04□□□□□ -2.42
POLR1AO95602 MIR409-201ENST00000362237 79 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 MIR101-1-201ENST00000362265 75 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 RNU1-119P-201ENST00000391122 165 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 CCNG1P1-201ENST00000406783 885 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 AC099677.2-201ENST00000436385 175 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 SNRPEP9-201ENST00000436794 238 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 AC068135.1-201ENST00000446164 246 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC-0.04□□□□□ -2.42
POLR1AO95602 RPS26P45-201ENST00000471748 340 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 RPL30P1-201ENST00000488676 339 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 AL160314.1-201ENST00000490836 438 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 RPL23AP54-201ENST00000495129 419 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC-0.04□□□□□ -2.42
POLR1AO95602 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.04□□□□□ -2.42
POLR1AO95602 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.04□□□□□ -2.42
POLR1AO95602 BPTFP1-201ENST00000579209 492 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 AC068620.3-201ENST00000602749 560 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 MIR4275-201ENST00000636486 87 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 SNORD114-6-201ENST00000364393 72 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 MIR604-201ENST00000384880 94 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.04□□□□□ -2.42
POLR1AO95602 AC007919.1-201ENST00000429380 217 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.04□□□□□ -2.42
POLR1AO95602 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-0.04□□□□□ -2.42
POLR1AO95602 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.04□□□□□ -2.42
POLR1AO95602 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.04□□□□□ -2.42
POLR1AO95602 AC079598.5-201ENST00000547460 117 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 MIR3678-201ENST00000578455 94 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 AC090330.1-201ENST00000588646 764 ntBASIC-0.04□□□□□ -2.42
POLR1AO95602 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.04□□□□□ -2.42
POLR1AO95602 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
POLR1AO95602 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.05□□□□□ -2.42
POLR1AO95602 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.05□□□□□ -2.42
POLR1AO95602 AC010385.1-201ENST00000412374 256 ntBASIC-0.05□□□□□ -2.42
POLR1AO95602 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.05□□□□□ -2.42
POLR1AO95602 RPL21P111-201ENST00000418453 477 ntBASIC-0.05□□□□□ -2.42
POLR1AO95602 AC002429.1-201ENST00000437672 148 ntBASIC-0.05□□□□□ -2.42
POLR1AO95602 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC-0.05□□□□□ -2.42
POLR1AO95602 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.05□□□□□ -2.42
POLR1AO95602 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.05□□□□□ -2.42
POLR1AO95602 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms