Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AL590808.1-201ENST00000618696 141 ntBASIC2.83□□□□□ -1.96
MBD4O95243 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.83□□□□□ -1.96
MBD4O95243 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
MBD4O95243 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MBD4O95243 MIR21-201ENST00000362134 72 ntBASIC2.82□□□□□ -1.96
MBD4O95243 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD4O95243 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.82□□□□□ -1.96
MBD4O95243 RNU6-1245P-201ENST00000411130 106 ntBASIC2.82□□□□□ -1.96
MBD4O95243 SNORD56-201ENST00000413522 71 ntBASIC2.82□□□□□ -1.96
MBD4O95243 MORF4L1P6-201ENST00000418771 268 ntBASIC2.82□□□□□ -1.96
MBD4O95243 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.82□□□□□ -1.96
MBD4O95243 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.82□□□□□ -1.96
MBD4O95243 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD4O95243 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD4O95243 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD4O95243 AC010486.1-201ENST00000511793 424 ntBASIC2.82□□□□□ -1.96
MBD4O95243 AC008549.1-201ENST00000512900 643 ntBASIC2.82□□□□□ -1.96
MBD4O95243 RNU2-53P-201ENST00000516257 147 ntBASIC2.82□□□□□ -1.96
MBD4O95243 RNA5SP281-201ENST00000516504 135 ntBASIC2.82□□□□□ -1.96
MBD4O95243 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.82□□□□□ -1.96
MBD4O95243 AC027807.1-201ENST00000559921 996 ntBASIC2.82□□□□□ -1.96
MBD4O95243 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD4O95243 AC009233.1-201ENST00000616477 371 ntBASIC2.82□□□□□ -1.96
MBD4O95243 AC008121.3-201ENST00000618726 433 ntBASIC2.82□□□□□ -1.96
MBD4O95243 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MBD4O95243 RNU6-529P-201ENST00000363383 104 ntBASIC2.81□□□□□ -1.96
MBD4O95243 SNORA69-201ENST00000383895 132 ntBASIC2.81□□□□□ -1.96
MBD4O95243 SNORA3.2-201ENST00000408221 125 ntBASIC2.81□□□□□ -1.96
MBD4O95243 AC008267.5-201ENST00000424928 265 ntBASIC2.81□□□□□ -1.96
MBD4O95243 SUMO1P4-201ENST00000429430 302 ntBASIC2.81□□□□□ -1.96
MBD4O95243 MTND3P21-201ENST00000433774 331 ntBASIC2.81□□□□□ -1.96
MBD4O95243 snoU13.14-201ENST00000459372 104 ntBASIC2.81□□□□□ -1.96
MBD4O95243 RPS27P27-201ENST00000498779 255 ntBASIC2.81□□□□□ -1.96
MBD4O95243 TBCAP3-201ENST00000512475 312 ntBASIC2.81□□□□□ -1.96
MBD4O95243 RNA5SP401-201ENST00000515920 127 ntBASIC2.81□□□□□ -1.96
MBD4O95243 Y_RNA.693-201ENST00000516641 110 ntBASIC2.81□□□□□ -1.96
MBD4O95243 COPS8P3-201ENST00000526024 482 ntBASIC2.81□□□□□ -1.96
MBD4O95243 CYCSP27-201ENST00000527643 293 ntBASIC2.81□□□□□ -1.96
MBD4O95243 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.81□□□□□ -1.96
MBD4O95243 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.81□□□□□ -1.96
MBD4O95243 RPL30P11-203ENST00000598995 310 ntBASIC2.81□□□□□ -1.96
MBD4O95243 AL713866.2-201ENST00000603579 219 ntBASIC2.81□□□□□ -1.96
MBD4O95243 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
MBD4O95243 AC099654.12-201ENST00000639868 649 ntBASIC2.81□□□□□ -1.96
MBD4O95243 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
MBD4O95243 RNU6-655P-201ENST00000362858 107 ntBASIC2.8□□□□□ -1.96
MBD4O95243 RNU6-105P-201ENST00000363909 104 ntBASIC2.8□□□□□ -1.96
MBD4O95243 Y_RNA.318-201ENST00000365131 97 ntBASIC2.8□□□□□ -1.96
MBD4O95243 CALM2P3-201ENST00000400429 449 ntBASIC2.8□□□□□ -1.96
MBD4O95243 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD4O95243 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MBD4O95243 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD4O95243 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD4O95243 AL121601.2-201ENST00000438019 707 ntBASIC2.8□□□□□ -1.96
MBD4O95243 AL161788.1-201ENST00000441805 169 ntBASIC2.8□□□□□ -1.96
MBD4O95243 AC007969.2-201ENST00000441891 191 ntBASIC2.8□□□□□ -1.96
MBD4O95243 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.8□□□□□ -1.96
MBD4O95243 AC090515.1-201ENST00000465295 476 ntBASIC2.8□□□□□ -1.96
MBD4O95243 CCDC34P1-201ENST00000507441 517 ntBASIC2.8□□□□□ -1.96
MBD4O95243 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD4O95243 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.8□□□□□ -1.96
MBD4O95243 AC009646.1-201ENST00000510455 318 ntBASIC2.8□□□□□ -1.96
MBD4O95243 RNA5SP24-201ENST00000516478 95 ntBASIC2.8□□□□□ -1.96
MBD4O95243 AC090115.3-201ENST00000553218 849 ntBASIC2.8□□□□□ -1.96
MBD4O95243 AL512360.1-201ENST00000555346 234 ntBASIC2.8□□□□□ -1.96
MBD4O95243 AL356575.1-201ENST00000603008 283 ntBASIC2.8□□□□□ -1.96
MBD4O95243 APOOP1-201ENST00000604695 592 ntBASIC2.8□□□□□ -1.96
MBD4O95243 AL355297.2-201ENST00000604792 129 ntBASIC2.8□□□□□ -1.96
MBD4O95243 AC123912.5-201ENST00000605470 343 ntBASIC2.8□□□□□ -1.96
MBD4O95243 AC013412.1-201ENST00000610687 192 ntBASIC2.8□□□□□ -1.96
MBD4O95243 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
MBD4O95243 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
MBD4O95243 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.79□□□□□ -1.96
MBD4O95243 RNU6-1210P-201ENST00000363775 107 ntBASIC2.79□□□□□ -1.96
MBD4O95243 RNU6-82P-201ENST00000363970 107 ntBASIC2.79□□□□□ -1.96
MBD4O95243 MIR95-201ENST00000385072 81 ntBASIC2.79□□□□□ -1.96
MBD4O95243 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
MBD4O95243 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.79□□□□□ -1.96
MBD4O95243 AC124916.1-201ENST00000444020 547 ntBASIC2.79□□□□□ -1.96
MBD4O95243 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.79□□□□□ -1.96
MBD4O95243 AC019235.1-201ENST00000503847 207 ntBASIC2.79□□□□□ -1.96
MBD4O95243 AC091885.1-201ENST00000506658 268 ntBASIC2.79□□□□□ -1.96
MBD4O95243 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.79□□□□□ -1.96
MBD4O95243 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.79□□□□□ -1.96
MBD4O95243 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.79□□□□□ -1.96
MBD4O95243 AC064859.1-201ENST00000624741 174 ntBASIC2.79□□□□□ -1.96
MBD4O95243 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
MBD4O95243 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.78□□□□□ -1.96
MBD4O95243 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.78□□□□□ -1.96
MBD4O95243 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.78□□□□□ -1.96
MBD4O95243 RNU6-212P-201ENST00000362642 104 ntBASIC2.78□□□□□ -1.96
MBD4O95243 RNU1-51P-201ENST00000365345 176 ntBASIC2.78□□□□□ -1.96
MBD4O95243 U8.8-201ENST00000365399 135 ntBASIC2.78□□□□□ -1.96
MBD4O95243 DEFA7P-201ENST00000382676 285 ntBASIC2.78□□□□□ -1.96
MBD4O95243 AC007064.1-201ENST00000412238 351 ntBASIC2.78□□□□□ -1.96
MBD4O95243 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.78□□□□□ -1.96
MBD4O95243 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.78□□□□□ -1.96
MBD4O95243 RPS15AP28-201ENST00000435088 386 ntBASIC2.78□□□□□ -1.96
MBD4O95243 AC018634.1-201ENST00000437554 401 ntBASIC2.78□□□□□ -1.96
MBD4O95243 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms