Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 snoU13.14-201ENST00000459372 104 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AC080013.2-201ENST00000460866 323 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AC008526.1-201ENST00000509149 338 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AC025465.4-201ENST00000513422 638 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.62□□□□□ -1.99
NKX2-2O95096 SNORA31.18-201ENST00000517043 134 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 SNORA70.24-201ENST00000517233 118 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-2O95096 AC022080.3-201ENST00000544433 482 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 SCOCP1-201ENST00000554676 349 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-2O95096 AC105137.2-201ENST00000569073 466 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 MIR4742-201ENST00000581069 85 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AC090616.3-201ENST00000582184 217 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AC093732.2-201ENST00000607950 274 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.62□□□□□ -1.99
NKX2-2O95096 AC241585.2-209ENST00000638217 143 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.62□□□□□ -1.99
NKX2-2O95096 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.62□□□□□ -1.99
NKX2-2O95096 MTND4P23-201ENST00000447723 1363 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.61□□□□□ -1.99
NKX2-2O95096 AC108206.1-201ENST00000570186 4159 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.61□□□□□ -1.99
NKX2-2O95096 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NKX2-2O95096 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
NKX2-2O95096 CBX3P1-201ENST00000325243 554 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 RNU6-562P-201ENST00000362731 107 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 SNORD116-11-201ENST00000383882 92 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 RNU6-767P-201ENST00000384132 107 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 RNU6-1222P-201ENST00000384615 107 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 MIR181B1-201ENST00000385240 110 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NKX2-2O95096 MTND3P8-201ENST00000412909 339 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 NDUFB4P5-201ENST00000415445 361 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AC092427.1-202ENST00000430569 476 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.61□□□□□ -1.99
NKX2-2O95096 UBBP3-201ENST00000445497 241 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AMD1P1-201ENST00000457220 922 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AC003982.1-202ENST00000469928 248 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AC096576.1-201ENST00000489014 359 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AC096745.1-201ENST00000509945 370 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-2O95096 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.61□□□□□ -1.99
NKX2-2O95096 MIR3199-1-201ENST00000582434 88 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-2O95096 AC073410.2-201ENST00000603240 332 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AL356280.1-201ENST00000603614 379 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AL356157.2-201ENST00000605122 111 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AL160281.1-201ENST00000605307 311 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AC104237.2-201ENST00000612456 443 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AL159153.1-201ENST00000619688 317 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 AC007792.1-201ENST00000623023 402 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NKX2-2O95096 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.61□□□□□ -1.99
NKX2-2O95096 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
NKX2-2O95096 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NKX2-2O95096 MTND4P27-201ENST00000450813 1354 ntBASIC2.61□□□□□ -1.99
NKX2-2O95096 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
NKX2-2O95096 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.6□□□□□ -1.99
NKX2-2O95096 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.6□□□□□ -1.99
NKX2-2O95096 MIR26A1-201ENST00000362205 77 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 Y_RNA.88-201ENST00000363029 99 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 Y_RNA.166-201ENST00000363730 102 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 RNA5SP387-201ENST00000364226 106 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 Y_RNA.333-201ENST00000365274 102 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NKX2-2O95096 DYNLT3P1-201ENST00000378574 347 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 RNU1-57P-201ENST00000384491 166 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 RNU6-692P-201ENST00000384496 107 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 RNU6-95P-201ENST00000384697 107 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 FO393413.1-201ENST00000402892 195 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.6□□□□□ -1.99
NKX2-2O95096 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.6□□□□□ -1.99
NKX2-2O95096 EIF4EP4-201ENST00000424916 578 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 AC104332.2-201ENST00000429959 156 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 MTCO1P29-201ENST00000496868 288 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 AC023141.11-201ENST00000508864 202 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.6□□□□□ -1.99
NKX2-2O95096 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.6□□□□□ -1.99
NKX2-2O95096 RNU6-1088P-201ENST00000516850 104 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.6□□□□□ -1.99
NKX2-2O95096 AC105245.1-201ENST00000581934 244 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 MIR3605-201ENST00000583214 100 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 MIR3117-201ENST00000584034 78 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 AP001836.1-201ENST00000604675 523 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 uc_338.15-201ENST00000615470 191 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 AC022306.2-201ENST00000617563 647 ntBASIC2.6□□□□□ -1.99
NKX2-2O95096 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.6□□□□□ -1.99
NKX2-2O95096 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.6□□□□□ -1.99
NKX2-2O95096 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NKX2-2O95096 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
NKX2-2O95096 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NKX2-2O95096 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
NKX2-2O95096 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NKX2-2O95096 OR56A5-201ENST00000340110 738 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 RNU6-845P-201ENST00000362578 103 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 SNORD32A-201ENST00000364805 84 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 RNU6-1180P-201ENST00000364935 107 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 SNORA9-201ENST00000384215 133 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms