Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SNORA31.23-201ENST00000517219 133 ntBASIC2.02□□□□□ -2.09
TRIM3O75382 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM3O75382 AC136619.2-201ENST00000563361 631 ntBASIC2.02□□□□□ -2.09
TRIM3O75382 AC008752.3-201ENST00000588113 712 ntBASIC2.02□□□□□ -2.09
TRIM3O75382 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM3O75382 RMST_4.1-201ENST00000616886 107 ntBASIC2.02□□□□□ -2.09
TRIM3O75382 AC009509.4-201ENST00000619202 509 ntBASIC2.02□□□□□ -2.09
TRIM3O75382 AC009831.4-201ENST00000620744 325 ntBASIC2.02□□□□□ -2.09
TRIM3O75382 MIR6873-201ENST00000622788 63 ntBASIC2.02□□□□□ -2.09
TRIM3O75382 AC009487.4-201ENST00000624969 3585 ntBASIC2.02□□□□□ -2.09
TRIM3O75382 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM3O75382 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM3O75382 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TRIM3O75382 RNA5SP276-201ENST00000362580 94 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 SNORD56.1-201ENST00000362913 68 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 RNU6-1120P-201ENST00000362988 108 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 RNU6-606P-201ENST00000384721 111 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 SNORA48.3-201ENST00000391081 134 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 RNU4-46P-201ENST00000410818 138 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 CDK8P2-201ENST00000415020 547 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 AC074117.2-201ENST00000417130 397 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 AC008267.5-201ENST00000424928 265 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM3O75382 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM3O75382 AL365400.1-201ENST00000431854 640 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM3O75382 AC096638.1-201ENST00000444678 216 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 TPT1P7-201ENST00000458300 517 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 AP001025.1-201ENST00000486139 332 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.01□□□□□ -2.09
TRIM3O75382 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM3O75382 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM3O75382 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.01□□□□□ -2.09
TRIM3O75382 OR11H5P-201ENST00000554039 926 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 MIR3611-201ENST00000584484 83 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 AC078899.2-201ENST00000595282 212 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM3O75382 AC073410.2-201ENST00000603240 332 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 AC087241.4-201ENST00000612441 480 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 MIR5739-201ENST00000619803 80 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 RMST_7.1-201ENST00000621935 268 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 AP003400.5-201ENST00000624827 617 ntBASIC2.01□□□□□ -2.09
TRIM3O75382 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM3O75382 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM3O75382 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRIM3O75382 RNU6-529P-201ENST00000363383 104 ntBASIC2□□□□□ -2.09
TRIM3O75382 Y_RNA.381-201ENST00000365666 102 ntBASIC2□□□□□ -2.09
TRIM3O75382 RNU6-622P-201ENST00000384272 103 ntBASIC2□□□□□ -2.09
TRIM3O75382 RNU1-57P-201ENST00000384491 166 ntBASIC2□□□□□ -2.09
TRIM3O75382 SNORD70.1-201ENST00000391007 85 ntBASIC2□□□□□ -2.09
TRIM3O75382 RAP1BP3-201ENST00000407180 549 ntBASIC2□□□□□ -2.09
TRIM3O75382 AL451074.3-201ENST00000437709 472 ntBASIC2□□□□□ -2.09
TRIM3O75382 AC009238.1-201ENST00000442165 424 ntBASIC2□□□□□ -2.09
TRIM3O75382 AC009237.6-201ENST00000446969 424 ntBASIC2□□□□□ -2.09
TRIM3O75382 RNA5SP233-201ENST00000459153 113 ntBASIC2□□□□□ -2.09
TRIM3O75382 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
TRIM3O75382 RPS3AP17-201ENST00000472594 777 ntBASIC2□□□□□ -2.09
TRIM3O75382 RPL9P6-201ENST00000492764 598 ntBASIC2□□□□□ -2.09
TRIM3O75382 AC079382.1-201ENST00000493346 557 ntBASIC2□□□□□ -2.09
TRIM3O75382 RPS29P21-201ENST00000496272 170 ntBASIC2□□□□□ -2.09
TRIM3O75382 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2□□□□□ -2.09
TRIM3O75382 MTCO3P7-201ENST00000510008 774 ntBASIC2□□□□□ -2.09
TRIM3O75382 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
TRIM3O75382 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
TRIM3O75382 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2□□□□□ -2.09
TRIM3O75382 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRIM3O75382 MTND1P15-201ENST00000579262 949 ntBASIC2□□□□□ -2.09
TRIM3O75382 MIR4648-201ENST00000580107 72 ntBASIC2□□□□□ -2.09
TRIM3O75382 LRRC37A5P-203ENST00000580181 585 ntBASIC2□□□□□ -2.09
TRIM3O75382 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2□□□□□ -2.09
TRIM3O75382 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2□□□□□ -2.09
TRIM3O75382 AL713866.2-201ENST00000603579 219 ntBASIC2□□□□□ -2.09
TRIM3O75382 NDUFA8P1-201ENST00000605525 367 ntBASIC2□□□□□ -2.09
TRIM3O75382 AC022202.1-201ENST00000613515 211 ntBASIC2□□□□□ -2.09
TRIM3O75382 uc_338.20-201ENST00000621563 178 ntBASIC2□□□□□ -2.09
TRIM3O75382 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
TRIM3O75382 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM3O75382 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
TRIM3O75382 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM3O75382 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM3O75382 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TRIM3O75382 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-37P-201ENST00000362692 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-78P-201ENST00000362897 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-11P-201ENST00000364234 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 Y_RNA.324-201ENST00000365165 102 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU5E-7P-201ENST00000365290 117 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-25P-201ENST00000383873 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-1-201ENST00000383898 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-48P-201ENST00000384161 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-36P-201ENST00000384172 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-4P-201ENST00000384205 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-5P-201ENST00000384238 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-3P-201ENST00000384314 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-16P-201ENST00000384385 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-393P-201ENST00000384475 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-15P-201ENST00000384534 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-2-201ENST00000384627 107 ntBASIC1.99□□□□□ -2.09
TRIM3O75382 RNU6-29P-201ENST00000384637 107 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms