Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.57□□□□□ -2.16
NPHP4O75161 MIR3118-1-201ENST00000581787 76 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AL031281.1-201ENST00000604049 488 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC105148.1-201ENST00000604961 409 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC018638.7-201ENST00000605836 1114 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC005014.3-201ENST00000605985 190 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.57□□□□□ -2.16
NPHP4O75161 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.57□□□□□ -2.16
NPHP4O75161 SNORD3E-201ENST00000362899 217 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 RNA5SP240-201ENST00000365355 128 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 RNU2-62P-201ENST00000410868 191 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 MTCO2P8-201ENST00000412213 658 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC138623.1-201ENST00000418060 216 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.57□□□□□ -2.16
NPHP4O75161 MTND5P25-201ENST00000430499 799 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.57□□□□□ -2.16
NPHP4O75161 CYP2C59P-201ENST00000457790 269 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.57□□□□□ -2.16
NPHP4O75161 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
NPHP4O75161 RNU6-677P-201ENST00000516914 101 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.57□□□□□ -2.16
NPHP4O75161 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.57□□□□□ -2.16
NPHP4O75161 MTCYBP33-201ENST00000575007 1130 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 MIR1273C-201ENST00000578669 77 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 RPL30P11-203ENST00000598995 310 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AL139022.2-201ENST00000606934 443 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC017037.3-201ENST00000625016 472 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.57□□□□□ -2.16
NPHP4O75161 Y_RNA.33-201ENST00000362591 102 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 MIR95-201ENST00000385072 81 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NPHP4O75161 AL008987.1-201ENST00000415528 237 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.56□□□□□ -2.16
NPHP4O75161 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.56□□□□□ -2.16
NPHP4O75161 HMGN1P33-201ENST00000432945 451 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.56□□□□□ -2.16
NPHP4O75161 RPL23AP3-201ENST00000453844 468 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.56□□□□□ -2.16
NPHP4O75161 HMGB1P35-201ENST00000503360 598 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.56□□□□□ -2.16
NPHP4O75161 AC119751.4-201ENST00000507498 357 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 RNU6-1003P-201ENST00000517099 105 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.56□□□□□ -2.16
NPHP4O75161 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.56□□□□□ -2.16
NPHP4O75161 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.56□□□□□ -2.16
NPHP4O75161 MTND4P33-201ENST00000556706 766 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AC092325.1-201ENST00000566449 554 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AL020996.3-201ENST00000606617 222 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AC144521.1-201ENST00000607148 956 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AC092953.2-201ENST00000608000 699 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AC093788.1-201ENST00000609356 927 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AL031667.3-201ENST00000620124 655 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AC006927.4-201ENST00000639187 543 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 RBBP8P1-201ENST00000449447 1844 ntBASIC1.56□□□□□ -2.16
NPHP4O75161 AC138393.1-203ENST00000327086 343 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 SNORD115-3-201ENST00000363100 82 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 MIR561-201ENST00000385216 97 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
NPHP4O75161 AL512604.1-201ENST00000404812 257 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 AC009518.2-201ENST00000418056 731 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.55□□□□□ -2.16
NPHP4O75161 AL353777.1-201ENST00000425552 326 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 AL596276.1-201ENST00000434465 418 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 RPL22P17-201ENST00000438729 315 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 CR769776.1-201ENST00000441254 787 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.55□□□□□ -2.16
NPHP4O75161 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.55□□□□□ -2.16
NPHP4O75161 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 AC096745.1-201ENST00000509945 370 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 RNA5SP384-201ENST00000516615 116 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 AC022616.6-201ENST00000520479 119 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.55□□□□□ -2.16
NPHP4O75161 IMMP1LP2-201ENST00000552954 492 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 AC093249.1-201ENST00000567049 203 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.55□□□□□ -2.16
NPHP4O75161 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.55□□□□□ -2.16
NPHP4O75161 ELOCP5-201ENST00000604924 333 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 AC087045.1-201ENST00000605856 382 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
NPHP4O75161 AC024940.5-201ENST00000622889 474 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 AC092192.1-201ENST00000633154 1018 ntBASIC1.55□□□□□ -2.16
NPHP4O75161 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.55□□□□□ -2.16
NPHP4O75161 AC106754.1-201ENST00000562632 1513 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 SNORD114-19-201ENST00000363072 75 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 RNU6-190P-201ENST00000384154 102 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 MIR513B-201ENST00000385136 84 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 RNA5SP450-201ENST00000411206 102 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 AC127391.1-201ENST00000411737 98 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.54□□□□□ -2.16
NPHP4O75161 RPL23AP30-201ENST00000432419 501 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.54□□□□□ -2.16
NPHP4O75161 AL008629.1-201ENST00000438615 184 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NPHP4O75161 RNA5SP137-201ENST00000516833 135 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.54□□□□□ -2.16
NPHP4O75161 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.54□□□□□ -2.16
NPHP4O75161 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.54□□□□□ -2.16
NPHP4O75161 AC090821.2-201ENST00000523552 176 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms