Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE3O75131 MTND5P35-201ENST00000557537 1720 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE3O75131 MIR410-201ENST00000362222 80 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 RNA5SP502-201ENST00000362694 119 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 Y_RNA.275-201ENST00000364726 110 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 Y_RNA.446-201ENST00000384178 104 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 RNU6-198P-201ENST00000384258 104 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 RNU6-748P-201ENST00000384648 107 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 SNORA57.1-201ENST00000391227 145 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 Y_RNA.590-201ENST00000410140 107 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 Y_RNA.626-201ENST00000411288 95 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 AC245291.1-201ENST00000419501 328 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 UQCRBP2-201ENST00000447827 297 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 RPL23AP3-201ENST00000453844 468 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 AC007215.1-201ENST00000464893 276 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 AIG1P1-201ENST00000503376 148 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 Y_RNA.679-201ENST00000516416 91 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 CYCSP23-201ENST00000519781 313 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 AC025884.1-201ENST00000556034 378 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 TVP23BP1-201ENST00000557500 617 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE3O75131 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CPNE3O75131 MIR8059-201ENST00000620427 81 ntBASIC4.13□□□□□ -1.75
CPNE3O75131 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE3O75131 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.13□□□□□ -1.75
CPNE3O75131 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE3O75131 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.13□□□□□ -1.75
CPNE3O75131 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE3O75131 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CPNE3O75131 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE3O75131 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE3O75131 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE3O75131 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE3O75131 AC002546.1-201ENST00000588041 2504 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 Y_RNA.122-201ENST00000363331 96 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 RNA5SP175-201ENST00000364275 119 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 Y_RNA.292-201ENST00000364904 97 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 SNORA72.2-201ENST00000365028 127 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 MIR549A-201ENST00000385268 96 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 MIR208B-201ENST00000401172 77 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 RNU2-49P-201ENST00000410666 184 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 CYCSP48-201ENST00000417124 323 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.12□□□□□ -1.75
CPNE3O75131 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.12□□□□□ -1.75
CPNE3O75131 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.12□□□□□ -1.75
CPNE3O75131 AC007395.1-201ENST00000451333 677 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 AL441985.1-201ENST00000457727 251 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 AC091959.1-201ENST00000495857 238 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 AL592156.1-201ENST00000508758 304 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 AC233702.2-202ENST00000562547 291 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 Z83818.1-201ENST00000603584 150 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 MZT1P2-201ENST00000604387 248 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.12□□□□□ -1.75
CPNE3O75131 FAM27D1-201ENST00000612308 341 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
CPNE3O75131 MIR492-201ENST00000638676 116 ntBASIC4.12□□□□□ -1.75
CPNE3O75131 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.12□□□□□ -1.75
CPNE3O75131 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE3O75131 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE3O75131 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.12□□□□□ -1.75
CPNE3O75131 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
CPNE3O75131 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE3O75131 BX322639.1-202ENST00000423987 2213 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPNE3O75131 AC106871.1-201ENST00000568324 3102 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPNE3O75131 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.11□□□□□ -1.75
CPNE3O75131 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 RNY4P28-201ENST00000365281 93 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 Y_RNA.383-201ENST00000383855 97 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 Y_RNA.418-201ENST00000384029 102 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 SNORA46.1-201ENST00000391069 153 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 U3.26-201ENST00000391236 204 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 RNU2-61P-201ENST00000411069 191 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 SNORA74C-2-201ENST00000411179 201 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 MTCO1P5-201ENST00000433573 344 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.11□□□□□ -1.75
CPNE3O75131 MRPS10P1-201ENST00000448483 130 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 RNU7-120P-201ENST00000459334 63 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 RNU6-625P-201ENST00000459412 107 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 RNU7-23P-201ENST00000459465 62 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 COX6CP14-201ENST00000469580 174 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 AP002884.2-201ENST00000471647 395 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CPNE3O75131 RN7SL691P-201ENST00000494487 301 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 AC026784.1-201ENST00000507986 352 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CPNE3O75131 AC107393.1-201ENST00000512403 346 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 AC074133.1-201ENST00000515696 183 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 RNU5F-2P-201ENST00000516066 82 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 SNORD116-28-201ENST00000516123 91 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.11□□□□□ -1.75
CPNE3O75131 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.11□□□□□ -1.75
CPNE3O75131 VN1R85P-201ENST00000601587 426 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 AL162713.1-201ENST00000604480 262 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 AC007546.2-201ENST00000623996 360 ntBASIC4.11□□□□□ -1.75
CPNE3O75131 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPNE3O75131 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms