Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.77□□□□□ -1.65
PTCD1O75127 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCD1O75127 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.77□□□□□ -1.65
PTCD1O75127 AC090617.3-201ENST00000573670 475 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 AC010928.2-201ENST00000588017 287 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.77□□□□□ -1.65
PTCD1O75127 AP001485.1-201ENST00000604799 199 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCD1O75127 MIR3651-201ENST00000630427 90 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.77□□□□□ -1.65
PTCD1O75127 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PTCD1O75127 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCD1O75127 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.77□□□□□ -1.65
PTCD1O75127 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCD1O75127 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCD1O75127 AC087190.4-201ENST00000574616 8334 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCD1O75127 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTCD1O75127 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
PTCD1O75127 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCD1O75127 RNU1-108P-201ENST00000362556 161 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.76□□□□□ -1.65
PTCD1O75127 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 RNA5SP129-201ENST00000410276 118 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 RNU6-1245P-201ENST00000411130 106 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCD1O75127 CYCSP4-201ENST00000429682 331 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCD1O75127 CYCSP32-201ENST00000440548 321 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 AC009296.1-201ENST00000443146 155 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 AC008155.2-201ENST00000464337 397 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCD1O75127 AC008011.1-201ENST00000545989 227 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 MIR3144-201ENST00000579460 79 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 AC011471.1-201ENST00000585766 187 ntBASIC4.76□□□□□ -1.65
PTCD1O75127 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTCD1O75127 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTCD1O75127 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
PTCD1O75127 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCD1O75127 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCD1O75127 LINC02555-201ENST00000563933 1951 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 RNA5SP189-201ENST00000364920 115 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 RNA5SP167-201ENST00000365461 116 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 RNU6-217P-201ENST00000384164 104 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 SNORA22C-201ENST00000384614 134 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 U3.39-201ENST00000408569 239 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.75□□□□□ -1.65
PTCD1O75127 RPL37P4-201ENST00000448908 268 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 MTATP6P7-201ENST00000453315 681 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 RPL23AP75-201ENST00000491601 451 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 RPL7P47-201ENST00000497299 556 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 AC005921.1-201ENST00000510589 286 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 SNORD116-28-201ENST00000516123 91 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 RNU6-1282P-201ENST00000516735 96 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 AC090877.1-201ENST00000561418 344 ntBASIC4.75□□□□□ -1.65
PTCD1O75127 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.75□□□□□ -1.65
PTCD1O75127 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.75□□□□□ -1.65
PTCD1O75127 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTCD1O75127 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.75□□□□□ -1.65
PTCD1O75127 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCD1O75127 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCD1O75127 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.74□□□□□ -1.65
PTCD1O75127 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTCD1O75127 MIR32-201ENST00000384965 70 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 RNA5SP424-201ENST00000390988 115 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 Y_RNA.581-201ENST00000391017 97 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 SNORD78.2-201ENST00000391076 69 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 RN7SKP177-201ENST00000410567 355 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 RNU6-651P-201ENST00000411040 105 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 Z92545.1-201ENST00000411782 234 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 RPL26P27-201ENST00000414397 437 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 BX679664.1-201ENST00000434429 253 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 AP000873.1-201ENST00000463987 400 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 RPL23AP14-201ENST00000468281 468 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.74□□□□□ -1.65
PTCD1O75127 AC023824.2-201ENST00000566185 400 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 AC011476.5-201ENST00000615594 130 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 SCARNA4-201ENST00000629045 128 ntBASIC4.74□□□□□ -1.65
PTCD1O75127 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTCD1O75127 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.74□□□□□ -1.65
PTCD1O75127 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.74□□□□□ -1.65
PTCD1O75127 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.73□□□□□ -1.65
PTCD1O75127 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PTCD1O75127 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.73□□□□□ -1.65
PTCD1O75127 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.73□□□□□ -1.65
PTCD1O75127 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCD1O75127 USP8P1-201ENST00000494673 3183 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 RNU6-778P-201ENST00000363269 103 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 RNU6-884P-201ENST00000363889 107 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 RNU1-73P-201ENST00000383971 164 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 RNU6-843P-201ENST00000384454 104 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 SNORD116-20-201ENST00000384529 92 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 MIR518D-201ENST00000385014 87 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 AL079342.1-201ENST00000401460 267 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 Y_RNA.602-201ENST00000410535 92 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 RNU6-394P-201ENST00000410735 107 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 DBIP2-201ENST00000419076 262 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 AC243964.1-201ENST00000441814 261 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms