Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PTP4A1P4-201ENST00000512479 322 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 SNORA31.23-201ENST00000517219 133 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.68□□□□□ -1.98
ZIC3O60481 DNAJC8P1-201ENST00000554535 372 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.68□□□□□ -1.98
ZIC3O60481 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.68□□□□□ -1.98
ZIC3O60481 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.68□□□□□ -1.98
ZIC3O60481 AC018462.2-201ENST00000605375 395 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC124303.1-201ENST00000605703 360 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC022140.2-201ENST00000623500 188 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 MTND4LP32-201ENST00000636111 270 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC091564.4-201ENST00000533934 2194 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ZIC3O60481 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ZIC3O60481 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.67□□□□□ -1.98
ZIC3O60481 AC004944.1-201ENST00000517807 3059 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
ZIC3O60481 MAPK10-266ENST00000641066 6555 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 RNU6-858P-201ENST00000362436 107 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 RNU1-105P-201ENST00000363470 161 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 RNU6-1188P-201ENST00000363795 107 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 RNU6-843P-201ENST00000384454 104 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ZIC3O60481 AF228730.4-201ENST00000421457 183 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.67□□□□□ -1.98
ZIC3O60481 AC009414.1-201ENST00000427200 443 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 USP9YP30-201ENST00000430729 455 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ZIC3O60481 FTH1P25-201ENST00000447665 469 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 RPL23AP49-201ENST00000492925 468 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 Y_RNA.718-201ENST00000517110 102 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.67□□□□□ -1.98
ZIC3O60481 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.67□□□□□ -1.98
ZIC3O60481 AC011471.1-201ENST00000585766 187 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 AL391813.1-201ENST00000603098 260 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 AC097372.5-201ENST00000623665 376 ntBASIC2.67□□□□□ -1.98
ZIC3O60481 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.66□□□□□ -1.98
ZIC3O60481 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.66□□□□□ -1.98
ZIC3O60481 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ZIC3O60481 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.66□□□□□ -1.98
ZIC3O60481 MTND5P27-201ENST00000428871 1720 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.66□□□□□ -1.98
ZIC3O60481 RNU6-527P-201ENST00000363425 104 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 Y_RNA.259-201ENST00000364619 101 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 CD24P4-201ENST00000382840 243 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 RNU6-851P-201ENST00000384565 107 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 RNU6-19P-201ENST00000384718 107 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 RNY4P36-201ENST00000391116 96 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 Y_RNA.594-201ENST00000410373 140 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 RNU6-1050P-201ENST00000410388 107 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 RPS20P15-201ENST00000412792 311 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 EEF1A1P41-201ENST00000414667 207 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 PTGES3P4-201ENST00000426243 356 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AL133396.1-201ENST00000432048 687 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AC236972.2-201ENST00000434979 310 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.66□□□□□ -1.98
ZIC3O60481 DAP3P1-201ENST00000441522 278 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AC133134.1-201ENST00000466800 359 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 RPS29P26-201ENST00000477483 171 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AP001025.1-201ENST00000486139 332 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 RN7SL633P-201ENST00000488974 297 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 Y_RNA.670-201ENST00000516255 105 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AC245166.1-201ENST00000521012 253 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AC010186.2-204ENST00000537668 439 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.66□□□□□ -1.98
ZIC3O60481 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.66□□□□□ -1.98
ZIC3O60481 BNIP3P16-201ENST00000589779 534 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AP000654.2-201ENST00000605633 586 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 AC110079.1-202ENST00000635213 138 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.66□□□□□ -1.98
ZIC3O60481 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ZIC3O60481 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
ZIC3O60481 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.66□□□□□ -1.98
ZIC3O60481 KPNA2P1-201ENST00000458289 1591 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 HAUS6P2-201ENST00000433254 2404 ntBASIC2.66□□□□□ -1.98
ZIC3O60481 SNORD56.1-201ENST00000362913 68 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 RNU6-1059P-201ENST00000363752 98 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 RNU4-76P-201ENST00000364509 141 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 Y_RNA.419-201ENST00000384041 102 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 Y_RNA.460-201ENST00000384255 102 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 RNU6-842P-201ENST00000384269 107 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 Y_RNA.473-201ENST00000384333 102 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 RNU6-748P-201ENST00000384648 107 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 SNORA75.4-201ENST00000391278 119 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 MTCYBP4-201ENST00000401524 249 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 AL513475.1-201ENST00000406602 315 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 RNU6-1304P-201ENST00000411374 106 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.65□□□□□ -1.99
ZIC3O60481 MTCO2P27-201ENST00000420740 428 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 AL139132.1-201ENST00000431587 344 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 AL591043.1-201ENST00000432461 424 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 AC004383.1-201ENST00000438135 289 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 AC243964.1-201ENST00000441814 261 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 AC007969.2-201ENST00000441891 191 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 UQCRHP3-201ENST00000451503 251 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 U8.21-201ENST00000459536 136 ntBASIC2.65□□□□□ -1.99
ZIC3O60481 RPS29P27-201ENST00000463711 170 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms