Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MSH5O43196 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.6□□□□□ -1.19
MSH5O43196 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
MSH5O43196 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MSH5O43196 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
MSH5O43196 Y_RNA.168-201ENST00000363740 102 ntBASIC7.6□□□□□ -1.19
MSH5O43196 RNU105B-201ENST00000364478 208 ntBASIC7.6□□□□□ -1.19
MSH5O43196 MIR223-201ENST00000385204 110 ntBASIC7.6□□□□□ -1.19
MSH5O43196 MIR802-201ENST00000390235 94 ntBASIC7.6□□□□□ -1.19
MSH5O43196 AL139148.1-201ENST00000427122 680 ntBASIC7.6□□□□□ -1.19
MSH5O43196 FGF7P7-201ENST00000514120 227 ntBASIC7.6□□□□□ -1.19
MSH5O43196 RNU6-1073P-201ENST00000517182 106 ntBASIC7.6□□□□□ -1.19
MSH5O43196 AC126615.2-201ENST00000553003 515 ntBASIC7.6□□□□□ -1.19
MSH5O43196 MIR4660-201ENST00000583549 74 ntBASIC7.6□□□□□ -1.19
MSH5O43196 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
MSH5O43196 AL137067.2-201ENST00000621202 131 ntBASIC7.6□□□□□ -1.19
MSH5O43196 AC021613.1-201ENST00000623880 111 ntBASIC7.6□□□□□ -1.19
MSH5O43196 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MSH5O43196 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MSH5O43196 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
MSH5O43196 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MSH5O43196 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
MSH5O43196 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC7.59□□□□□ -1.19
MSH5O43196 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
MSH5O43196 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
MSH5O43196 Y_RNA.547-201ENST00000384654 119 ntBASIC7.59□□□□□ -1.19
MSH5O43196 RN7SKP125-201ENST00000410481 302 ntBASIC7.59□□□□□ -1.19
MSH5O43196 RNU2-50P-201ENST00000410494 143 ntBASIC7.59□□□□□ -1.19
MSH5O43196 AL590762.4-201ENST00000425885 253 ntBASIC7.59□□□□□ -1.19
MSH5O43196 ENSA-211ENST00000503345 793 ntTSL 3 BASIC7.59□□□□□ -1.19
MSH5O43196 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.59□□□□□ -1.19
MSH5O43196 RNU4ATAC-201ENST00000580972 127 ntBASIC7.59□□□□□ -1.19
MSH5O43196 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.59□□□□□ -1.19
MSH5O43196 AP000550.3-201ENST00000637734 379 ntBASIC7.59□□□□□ -1.19
MSH5O43196 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
MSH5O43196 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
MSH5O43196 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
MSH5O43196 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
MSH5O43196 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
MSH5O43196 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
MSH5O43196 RN7SKP145-201ENST00000363291 303 ntBASIC7.58□□□□□ -1.2
MSH5O43196 Y_RNA.443-201ENST00000384135 111 ntBASIC7.58□□□□□ -1.2
MSH5O43196 MIR1283-1-201ENST00000408494 87 ntBASIC7.58□□□□□ -1.2
MSH5O43196 RPL23AP27-201ENST00000415161 451 ntBASIC7.58□□□□□ -1.2
MSH5O43196 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC7.58□□□□□ -1.2
MSH5O43196 RPS29P28-201ENST00000446439 141 ntBASIC7.58□□□□□ -1.2
MSH5O43196 U3.44-201ENST00000458938 192 ntBASIC7.58□□□□□ -1.2
MSH5O43196 RPS27AP10-201ENST00000496103 208 ntBASIC7.58□□□□□ -1.2
MSH5O43196 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.58□□□□□ -1.2
MSH5O43196 IGHVIII-5-1-201ENST00000523059 99 ntBASIC7.58□□□□□ -1.2
MSH5O43196 HMGN2P6-201ENST00000551091 273 ntBASIC7.58□□□□□ -1.2
MSH5O43196 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC7.58□□□□□ -1.2
MSH5O43196 MIR4511-201ENST00000582784 87 ntBASIC7.58□□□□□ -1.2
MSH5O43196 MIR6837-201ENST00000620884 64 ntBASIC7.58□□□□□ -1.2
MSH5O43196 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
MSH5O43196 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
MSH5O43196 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MSH5O43196 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MSH5O43196 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC7.57□□□□□ -1.2
MSH5O43196 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
MSH5O43196 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
MSH5O43196 AL133270.1-201ENST00000402635 279 ntBASIC7.57□□□□□ -1.2
MSH5O43196 RN7SKP111-201ENST00000410349 271 ntBASIC7.57□□□□□ -1.2
MSH5O43196 AC060773.1-201ENST00000421698 310 ntBASIC7.57□□□□□ -1.2
MSH5O43196 AC016717.1-201ENST00000448918 286 ntBASIC7.57□□□□□ -1.2
MSH5O43196 RN7SL172P-201ENST00000460535 303 ntBASIC7.57□□□□□ -1.2
MSH5O43196 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC7.57□□□□□ -1.2
MSH5O43196 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC7.57□□□□□ -1.2
MSH5O43196 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC7.57□□□□□ -1.2
MSH5O43196 AC103706.3-201ENST00000636297 85 ntBASIC7.57□□□□□ -1.2
MSH5O43196 Clostridiales-1.3-201ENST00000637703 147 ntBASIC7.57□□□□□ -1.2
MSH5O43196 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
MSH5O43196 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
MSH5O43196 AC092376.2-201ENST00000622621 4116 ntBASIC7.57□□□□□ -1.2
MSH5O43196 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC7.56□□□□□ -1.2
MSH5O43196 RN7SKP185-201ENST00000362813 326 ntBASIC7.56□□□□□ -1.2
MSH5O43196 MIR181B2-201ENST00000385004 89 ntBASIC7.56□□□□□ -1.2
MSH5O43196 MIR548G-201ENST00000408442 89 ntBASIC7.56□□□□□ -1.2
MSH5O43196 CKS1BP5-201ENST00000434172 273 ntBASIC7.56□□□□□ -1.2
MSH5O43196 MIR4753-201ENST00000585119 83 ntBASIC7.56□□□□□ -1.2
MSH5O43196 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.56□□□□□ -1.2
MSH5O43196 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
MSH5O43196 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MSH5O43196 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
MSH5O43196 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
MSH5O43196 AC063976.2-201ENST00000425667 3556 ntBASIC7.55□□□□□ -1.2
MSH5O43196 AC026951.1-201ENST00000559530 2459 ntBASIC7.55□□□□□ -1.2
MSH5O43196 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC7.55□□□□□ -1.2
MSH5O43196 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms