Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RPL31P41-201ENST00000477967 372 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 FO393415.2-201ENST00000480085 343 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.19□□□□□ -1.9
PHGDHO43175 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.19□□□□□ -1.9
PHGDHO43175 AC097473.1-201ENST00000508142 408 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.19□□□□□ -1.9
PHGDHO43175 AC005741.1-201ENST00000511094 432 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.19□□□□□ -1.9
PHGDHO43175 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.19□□□□□ -1.9
PHGDHO43175 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.19□□□□□ -1.9
PHGDHO43175 AC105137.2-201ENST00000569073 466 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 AC011471.1-201ENST00000585766 187 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 RPS15AP11-201ENST00000594193 385 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.19□□□□□ -1.9
PHGDHO43175 U3.45-201ENST00000607547 219 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 AC096772.1-201ENST00000609146 564 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 uc_338.14-201ENST00000613162 166 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 AC007742.2-201ENST00000618226 398 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.19□□□□□ -1.9
PHGDHO43175 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.19□□□□□ -1.9
PHGDHO43175 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PHGDHO43175 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PHGDHO43175 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.18□□□□□ -1.9
PHGDHO43175 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.18□□□□□ -1.9
PHGDHO43175 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PHGDHO43175 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PHGDHO43175 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
PHGDHO43175 Y_RNA.132-201ENST00000363421 102 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 RNA5SP50-201ENST00000363731 107 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 RNU6-331P-201ENST00000384724 107 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 MIR23B-201ENST00000384832 97 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 SAR1AP2-201ENST00000392696 594 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 RPL23AP50-201ENST00000434149 455 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 AL031659.1-201ENST00000447075 539 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.18□□□□□ -1.9
PHGDHO43175 RPL39P29-201ENST00000447779 157 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 AC027575.1-201ENST00000481064 460 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 RNA5SP384-201ENST00000516615 116 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 RNU6-307P-201ENST00000516743 106 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.18□□□□□ -1.9
PHGDHO43175 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.18□□□□□ -1.9
PHGDHO43175 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.18□□□□□ -1.9
PHGDHO43175 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.18□□□□□ -1.9
PHGDHO43175 AC005899.2-201ENST00000584353 90 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.18□□□□□ -1.9
PHGDHO43175 AC080078.3-201ENST00000605407 463 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.18□□□□□ -1.9
PHGDHO43175 AC099654.7-201ENST00000635788 2127 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PHGDHO43175 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.17□□□□□ -1.9
PHGDHO43175 Y_RNA.146-201ENST00000363549 102 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 Y_RNA.187-201ENST00000363918 113 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 RNU6-1222P-201ENST00000384615 107 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 AL591034.2-201ENST00000402839 359 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.17□□□□□ -1.9
PHGDHO43175 BX276092.3-201ENST00000424182 230 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 MTCO2P12-201ENST00000427426 682 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 AC009296.1-201ENST00000443146 155 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.17□□□□□ -1.9
PHGDHO43175 ELOCP24-201ENST00000456370 334 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.17□□□□□ -1.9
PHGDHO43175 AC008155.2-201ENST00000464337 397 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.17□□□□□ -1.9
PHGDHO43175 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.17□□□□□ -1.9
PHGDHO43175 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.17□□□□□ -1.9
PHGDHO43175 AC093303.1-201ENST00000514549 295 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 RNU6-1170P-201ENST00000515974 106 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 SCARNA17.1-201ENST00000516211 143 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 SNORA31.6-201ENST00000516241 130 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 SCARNA17.2-201ENST00000516334 143 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 SCARNA16.2-201ENST00000516520 172 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.17□□□□□ -1.9
PHGDHO43175 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.17□□□□□ -1.9
PHGDHO43175 AC093249.1-201ENST00000567049 203 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 MIR2682-201ENST00000580305 110 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 AC012493.2-201ENST00000595083 291 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.17□□□□□ -1.9
PHGDHO43175 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.17□□□□□ -1.9
PHGDHO43175 AL137843.1-201ENST00000605078 385 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 SCARNA17.4-201ENST00000614296 143 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 HMGB1P24-202ENST00000615653 685 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PHGDHO43175 MIR6075-201ENST00000620782 95 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 AC092608.2-201ENST00000624427 218 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.17□□□□□ -1.9
PHGDHO43175 Z83843.1-201ENST00000604070 3685 ntBASIC3.17□□□□□ -1.9
PHGDHO43175 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PHGDHO43175 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PHGDHO43175 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PHGDHO43175 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PHGDHO43175 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.16□□□□□ -1.9
PHGDHO43175 MTND5P19-201ENST00000424872 1794 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 SNORD114-19-201ENST00000363072 75 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 RNU6-890P-201ENST00000384121 107 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 MIR7-3-201ENST00000384898 110 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 U3.26-201ENST00000391236 204 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PHGDHO43175 EIF4EP2-201ENST00000422816 654 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms