Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.78□□□□□ -1.96
ATP2A1O14983 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 AL358075.3-201ENST00000426289 226 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 MTND1P2-201ENST00000430604 821 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 NFU1P2-201ENST00000448700 469 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.78□□□□□ -1.96
ATP2A1O14983 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.78□□□□□ -1.96
ATP2A1O14983 ANXA2P1-201ENST00000505539 926 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 AC116655.1-201ENST00000508324 901 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 RNU6-581P-201ENST00000516214 105 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 Y_RNA.687-201ENST00000516558 91 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 AC004486.1-201ENST00000546846 233 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 MIR3670-2-201ENST00000582974 65 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 MIR3670-1-201ENST00000584160 65 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 MIR3670-3-201ENST00000584855 65 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 AC104984.5-201ENST00000586878 94 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 AC091152.3-201ENST00000604227 325 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 MIR3670-4-201ENST00000612260 65 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ATP2A1O14983 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.78□□□□□ -1.96
ATP2A1O14983 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
ATP2A1O14983 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ATP2A1O14983 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 U8.2-201ENST00000363156 134 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 RN7SKP223-201ENST00000410582 62 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.77□□□□□ -1.97
ATP2A1O14983 snoU109.2-201ENST00000459316 135 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.77□□□□□ -1.97
ATP2A1O14983 Y_RNA.665-201ENST00000516177 98 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.77□□□□□ -1.97
ATP2A1O14983 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.77□□□□□ -1.97
ATP2A1O14983 AC103810.1-201ENST00000579873 453 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 AC060766.3-201ENST00000591442 263 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 AC005261.5-201ENST00000596280 355 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 AL391813.1-201ENST00000603098 260 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 AP000787.2-201ENST00000604432 568 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 AC046143.2-201ENST00000609789 160 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
ATP2A1O14983 AC010378.1-201ENST00000619270 362 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.77□□□□□ -1.97
ATP2A1O14983 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 Z69720.2-201ENST00000624755 279 ntBASIC2.77□□□□□ -1.97
ATP2A1O14983 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
ATP2A1O14983 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ATP2A1O14983 RNU6-332P-201ENST00000391193 108 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 EIF4E2P1-201ENST00000393781 255 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 Y_RNA.615-201ENST00000410769 117 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 PTGES3P4-201ENST00000426243 356 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 AC092427.1-202ENST00000430569 476 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 AC006026.2-201ENST00000457376 180 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 RPL23AP70-201ENST00000483361 460 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 AC069439.1-201ENST00000494739 167 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 RPS29P21-201ENST00000496272 170 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 MTCYBP18-201ENST00000501056 747 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 TBCAP3-201ENST00000512475 312 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.76□□□□□ -1.97
ATP2A1O14983 RPPH1-2P-201ENST00000516688 293 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 ACA59.2-201ENST00000517061 156 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 AC021269.2-201ENST00000532318 330 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.76□□□□□ -1.97
ATP2A1O14983 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.76□□□□□ -1.97
ATP2A1O14983 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.76□□□□□ -1.97
ATP2A1O14983 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.76□□□□□ -1.97
ATP2A1O14983 AC060780.3-201ENST00000589464 80 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 BNIP3P25-201ENST00000596023 559 ntBASIC2.76□□□□□ -1.97
ATP2A1O14983 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
ATP2A1O14983 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
ATP2A1O14983 AC069528.2-201ENST00000624849 1991 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 RNU6-942P-201ENST00000363002 107 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 SET-203ENST00000372688 801 ntTSL 2 BASIC2.75□□□□□ -1.97
ATP2A1O14983 SNORA41-201ENST00000384675 132 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 RNU6-19P-201ENST00000384718 107 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.75□□□□□ -1.97
ATP2A1O14983 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.75□□□□□ -1.97
ATP2A1O14983 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.75□□□□□ -1.97
ATP2A1O14983 RBMX2P4-201ENST00000441256 376 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 AC009296.1-201ENST00000443146 155 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 OSTCP8-201ENST00000445117 448 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.75□□□□□ -1.97
ATP2A1O14983 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ATP2A1O14983 AP000705.1-201ENST00000454567 350 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 AC087884.1-201ENST00000469738 328 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 RPL31P41-201ENST00000477967 372 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 AIG1P1-201ENST00000503376 148 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 AC026436.1-201ENST00000510537 270 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 MRPS36P2-201ENST00000512569 299 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 SNORA19.2-201ENST00000516013 114 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 RNU6-358P-201ENST00000516564 75 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ATP2A1O14983 AC023050.3-201ENST00000541142 333 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.75□□□□□ -1.97
ATP2A1O14983 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.75□□□□□ -1.97
ATP2A1O14983 AP001094.1-201ENST00000579805 193 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.75□□□□□ -1.97
ATP2A1O14983 AC008121.1-201ENST00000603244 268 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 RBM11P1-201ENST00000604951 799 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 MIR6715A-201ENST00000615929 79 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 AC006504.8-201ENST00000621046 635 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 RMST_7.1-201ENST00000621935 268 ntBASIC2.75□□□□□ -1.97
ATP2A1O14983 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms