Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 AC109329.1-201ENST00000518744 317 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 COPS8P3-201ENST00000526024 482 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.13□□□□□ -2.23
UBFD1O14562 CR383656.8-201ENST00000549046 145 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.13□□□□□ -2.23
UBFD1O14562 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.13□□□□□ -2.23
UBFD1O14562 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.13□□□□□ -2.23
UBFD1O14562 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.13□□□□□ -2.23
UBFD1O14562 BNIP3P40-201ENST00000596017 556 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 DEFB131E-202ENST00000602581 683 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 AC073413.2-201ENST00000604332 360 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 AL158050.2-201ENST00000605336 568 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 MIR3529-201ENST00000637713 78 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 FARSBP1-201ENST00000435808 1778 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
UBFD1O14562 snoU2_19.1-201ENST00000362361 80 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 RNU6-655P-201ENST00000362858 107 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 RNU6-960P-201ENST00000364056 120 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
UBFD1O14562 SNORD14D-201ENST00000384390 87 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 SNORD116-20-201ENST00000384529 92 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 MIR29C-201ENST00000385231 88 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
UBFD1O14562 RNA5SP465-201ENST00000391195 109 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 BTF3L4P2-201ENST00000392798 346 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 RNU2-62P-201ENST00000410868 191 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 AC009310.1-201ENST00000414414 451 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 AL031779.1-201ENST00000415663 330 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 RPL30P13-201ENST00000418873 348 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 EIF4EP2-201ENST00000422816 654 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.12□□□□□ -2.23
UBFD1O14562 AC092648.1-201ENST00000425870 423 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.12□□□□□ -2.23
UBFD1O14562 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.12□□□□□ -2.23
UBFD1O14562 RPL23AP30-201ENST00000432419 501 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.12□□□□□ -2.23
UBFD1O14562 AC003071.1-201ENST00000451219 789 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.12□□□□□ -2.23
UBFD1O14562 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.12□□□□□ -2.23
UBFD1O14562 FAM206BP-201ENST00000510179 541 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 RNVU1-2-201ENST00000516326 135 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 RNU6-1003P-201ENST00000517099 105 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.12□□□□□ -2.23
UBFD1O14562 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.12□□□□□ -2.23
UBFD1O14562 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.12□□□□□ -2.23
UBFD1O14562 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.12□□□□□ -2.23
UBFD1O14562 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.12□□□□□ -2.23
UBFD1O14562 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.12□□□□□ -2.23
UBFD1O14562 AL022154.1-201ENST00000604698 785 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 AC097478.2-201ENST00000610572 514 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 AC063943.3-201ENST00000615562 356 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 RMST_2.1-201ENST00000617263 136 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 AL049777.1-201ENST00000622740 518 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 MIR1248-201ENST00000629190 106 ntBASIC1.12□□□□□ -2.23
UBFD1O14562 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.12□□□□□ -2.23
UBFD1O14562 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBFD1O14562 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
UBFD1O14562 ZNF29P-201ENST00000225587 168 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 RNU1-58P-201ENST00000362413 163 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 Y_RNA.97-201ENST00000363094 102 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 RNU6-157P-201ENST00000383957 107 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 RNU6-439P-201ENST00000384188 106 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 RNU6-636P-201ENST00000384598 107 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 MIR10A-201ENST00000385043 110 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
UBFD1O14562 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.11□□□□□ -2.23
UBFD1O14562 AC114491.1-201ENST00000416095 246 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.11□□□□□ -2.23
UBFD1O14562 UBE2V1P4-201ENST00000425374 344 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.11□□□□□ -2.23
UBFD1O14562 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.11□□□□□ -2.23
UBFD1O14562 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.11□□□□□ -2.23
UBFD1O14562 RPL30P6-201ENST00000475925 342 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 AC114801.2-201ENST00000503825 781 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.11□□□□□ -2.23
UBFD1O14562 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.11□□□□□ -2.23
UBFD1O14562 AC022616.8-201ENST00000533569 253 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.11□□□□□ -2.23
UBFD1O14562 BNIP3P6-201ENST00000549284 499 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 MIR3198-2-201ENST00000577868 80 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 AC012065.4-201ENST00000602445 679 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.11□□□□□ -2.23
UBFD1O14562 AC093648.1-201ENST00000623546 606 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.11□□□□□ -2.23
UBFD1O14562 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.11□□□□□ -2.23
UBFD1O14562 AC103706.2-201ENST00000638080 240 ntBASIC1.11□□□□□ -2.23
UBFD1O14562 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBFD1O14562 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBFD1O14562 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBFD1O14562 MIR424-201ENST00000362227 98 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 RNY1-201ENST00000364228 113 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 SNORD14B-201ENST00000364533 90 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 RNU6-384P-201ENST00000364900 104 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 MIR7-2-201ENST00000384970 110 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 CBX3P9-201ENST00000402326 552 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 RNA5SP100-201ENST00000410903 110 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms