Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU6-39P-201ENST00000384344 107 ntBASIC1.42□□□□□ -2.18
DFFAO00273 MIR513B-201ENST00000385136 84 ntBASIC1.42□□□□□ -2.18
DFFAO00273 AC068050.1-201ENST00000394891 380 ntBASIC1.42□□□□□ -2.18
DFFAO00273 AC114491.1-201ENST00000416095 246 ntBASIC1.42□□□□□ -2.18
DFFAO00273 MTCYBP5-201ENST00000423752 1135 ntBASIC1.42□□□□□ -2.18
DFFAO00273 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.42□□□□□ -2.18
DFFAO00273 HMGB1P31-201ENST00000437242 427 ntBASIC1.42□□□□□ -2.18
DFFAO00273 MTND5P2-201ENST00000442927 1142 ntBASIC1.42□□□□□ -2.18
DFFAO00273 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.42□□□□□ -2.18
DFFAO00273 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.42□□□□□ -2.18
DFFAO00273 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
DFFAO00273 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.42□□□□□ -2.18
DFFAO00273 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.42□□□□□ -2.18
DFFAO00273 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.42□□□□□ -2.18
DFFAO00273 AL512598.1-201ENST00000610158 273 ntBASIC1.42□□□□□ -2.18
DFFAO00273 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.42□□□□□ -2.18
DFFAO00273 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.42□□□□□ -2.18
DFFAO00273 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
DFFAO00273 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
DFFAO00273 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.41□□□□□ -2.18
DFFAO00273 SNORD56.1-201ENST00000362913 68 ntBASIC1.41□□□□□ -2.18
DFFAO00273 Y_RNA.99-201ENST00000363138 105 ntBASIC1.41□□□□□ -2.18
DFFAO00273 RNU6-743P-201ENST00000364151 106 ntBASIC1.41□□□□□ -2.18
DFFAO00273 RPS15AP10-201ENST00000432472 382 ntBASIC1.41□□□□□ -2.18
DFFAO00273 AC119618.1-201ENST00000434191 222 ntBASIC1.41□□□□□ -2.18
DFFAO00273 AL354941.1-201ENST00000438600 464 ntBASIC1.41□□□□□ -2.18
DFFAO00273 AL606662.1-201ENST00000445763 553 ntBASIC1.41□□□□□ -2.18
DFFAO00273 AL360271.2-201ENST00000447710 161 ntBASIC1.41□□□□□ -2.18
DFFAO00273 DUXAP8-207ENST00000456786 622 ntBASIC1.41□□□□□ -2.18
DFFAO00273 RN7SKP210-201ENST00000459176 261 ntBASIC1.41□□□□□ -2.18
DFFAO00273 RPL30P12-201ENST00000474666 353 ntBASIC1.41□□□□□ -2.18
DFFAO00273 RPL30P6-201ENST00000475925 342 ntBASIC1.41□□□□□ -2.18
DFFAO00273 AC010587.1-201ENST00000505809 469 ntBASIC1.41□□□□□ -2.18
DFFAO00273 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.41□□□□□ -2.18
DFFAO00273 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.41□□□□□ -2.18
DFFAO00273 MTND1P8-201ENST00000571424 950 ntBASIC1.41□□□□□ -2.18
DFFAO00273 MIR3198-2-201ENST00000577868 80 ntBASIC1.41□□□□□ -2.18
DFFAO00273 MIR4769-201ENST00000584126 77 ntBASIC1.41□□□□□ -2.18
DFFAO00273 AL359999.1-201ENST00000604513 294 ntBASIC1.41□□□□□ -2.18
DFFAO00273 AC092140.2-201ENST00000618027 521 ntBASIC1.41□□□□□ -2.18
DFFAO00273 AC106754.1-201ENST00000562632 1513 ntBASIC1.4□□□□□ -2.18
DFFAO00273 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.4□□□□□ -2.19
DFFAO00273 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
DFFAO00273 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
DFFAO00273 SNORD113-6-201ENST00000363345 75 ntBASIC1.4□□□□□ -2.19
DFFAO00273 RNU6-203P-201ENST00000384038 104 ntBASIC1.4□□□□□ -2.19
DFFAO00273 EEF1A1P40-201ENST00000412883 573 ntBASIC1.4□□□□□ -2.19
DFFAO00273 BTF3L4P1-201ENST00000413813 468 ntBASIC1.4□□□□□ -2.19
DFFAO00273 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.4□□□□□ -2.19
DFFAO00273 SSR1P2-201ENST00000415208 787 ntBASIC1.4□□□□□ -2.19
DFFAO00273 AC007283.2-201ENST00000424739 197 ntBASIC1.4□□□□□ -2.19
DFFAO00273 VN1R108P-201ENST00000431580 830 ntBASIC1.4□□□□□ -2.19
DFFAO00273 RPS24P1-201ENST00000438550 371 ntBASIC1.4□□□□□ -2.19
DFFAO00273 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.4□□□□□ -2.19
DFFAO00273 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.4□□□□□ -2.19
DFFAO00273 RPL30P1-201ENST00000488676 339 ntBASIC1.4□□□□□ -2.19
DFFAO00273 MTCO3P9-201ENST00000506989 781 ntBASIC1.4□□□□□ -2.19
DFFAO00273 AC034244.1-201ENST00000507687 207 ntBASIC1.4□□□□□ -2.19
DFFAO00273 MTCYBP40-201ENST00000509390 1135 ntBASIC1.4□□□□□ -2.19
DFFAO00273 AC093259.1-201ENST00000509755 300 ntBASIC1.4□□□□□ -2.19
DFFAO00273 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.4□□□□□ -2.19
DFFAO00273 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
DFFAO00273 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.4□□□□□ -2.19
DFFAO00273 AL354943.1-201ENST00000572103 781 ntBASIC1.4□□□□□ -2.19
DFFAO00273 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.4□□□□□ -2.19
DFFAO00273 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.4□□□□□ -2.19
DFFAO00273 AC105129.3-201ENST00000605455 485 ntBASIC1.4□□□□□ -2.19
DFFAO00273 AL031775.1-201ENST00000607014 887 ntBASIC1.4□□□□□ -2.19
DFFAO00273 RNU6-87P-201ENST00000607561 108 ntBASIC1.4□□□□□ -2.19
DFFAO00273 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.4□□□□□ -2.19
DFFAO00273 AC022306.3-201ENST00000619930 550 ntBASIC1.4□□□□□ -2.19
DFFAO00273 AL157786.1-207ENST00000627771 695 ntBASIC1.4□□□□□ -2.19
DFFAO00273 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
DFFAO00273 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
DFFAO00273 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
DFFAO00273 RNU5F-6P-201ENST00000362979 116 ntBASIC1.39□□□□□ -2.19
DFFAO00273 SNORA24.1-201ENST00000384401 135 ntBASIC1.39□□□□□ -2.19
DFFAO00273 MIR558-201ENST00000384920 94 ntBASIC1.39□□□□□ -2.19
DFFAO00273 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
DFFAO00273 Y_RNA.597-201ENST00000410463 100 ntBASIC1.39□□□□□ -2.19
DFFAO00273 MTATP6P19-201ENST00000413797 659 ntBASIC1.39□□□□□ -2.19
DFFAO00273 CBX3P6-201ENST00000430257 527 ntBASIC1.39□□□□□ -2.19
DFFAO00273 HMGB1P18-201ENST00000438801 619 ntBASIC1.39□□□□□ -2.19
DFFAO00273 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.39□□□□□ -2.19
DFFAO00273 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.39□□□□□ -2.19
DFFAO00273 AL590365.1-201ENST00000450788 243 ntBASIC1.39□□□□□ -2.19
DFFAO00273 RNU7-95P-201ENST00000459222 64 ntBASIC1.39□□□□□ -2.19
DFFAO00273 FO393415.2-201ENST00000480085 343 ntBASIC1.39□□□□□ -2.19
DFFAO00273 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.39□□□□□ -2.19
DFFAO00273 RNU1-86P-201ENST00000516108 154 ntBASIC1.39□□□□□ -2.19
DFFAO00273 RNU1-107P-201ENST00000516617 154 ntBASIC1.39□□□□□ -2.19
DFFAO00273 AP003181.2-201ENST00000528941 181 ntBASIC1.39□□□□□ -2.19
DFFAO00273 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.39□□□□□ -2.19
DFFAO00273 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.39□□□□□ -2.19
DFFAO00273 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.39□□□□□ -2.19
DFFAO00273 PCMTD1P2-201ENST00000565017 355 ntBASIC1.39□□□□□ -2.19
DFFAO00273 AC091135.1-201ENST00000585943 307 ntBASIC1.39□□□□□ -2.19
DFFAO00273 VN1R80P-201ENST00000597126 338 ntBASIC1.39□□□□□ -2.19
DFFAO00273 AL136363.2-201ENST00000604173 851 ntBASIC1.39□□□□□ -2.19
DFFAO00273 AC016925.2-201ENST00000605108 242 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 638.7 ms