Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC010493.1-201ENST00000513479 292 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AL138976.2-201ENST00000563989 694 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AC023824.2-201ENST00000566185 400 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AP000907.4-201ENST00000604143 237 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AC002044.1-201ENST00000606707 158 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AC068944.2-201ENST00000610373 403 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AP001486.3-201ENST00000615334 372 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 FRG1KP-201ENST00000623592 341 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 U6.114-201ENST00000636407 96 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AC004520.1-201ENST00000608362 1413 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AL109809.4-201ENST00000603520 2185 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 NACAP2-201ENST00000318548 624 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AC138393.1-203ENST00000327086 343 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 Y_RNA.33-201ENST00000362591 102 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 Y_RNA.89-201ENST00000363031 102 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1283P-201ENST00000365314 105 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-38P-201ENST00000384085 107 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 MIR518D-201ENST00000385014 87 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1140P-201ENST00000410517 106 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 BPY2DP-201ENST00000422208 265 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AL139415.2-201ENST00000431968 163 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AC092001.1-201ENST00000453012 261 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AL139109.1-201ENST00000455491 297 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 RPL26P9-201ENST00000457466 433 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 SCARNA18-201ENST00000459004 134 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-333P-201ENST00000459117 107 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 DYNLL1P5-201ENST00000467158 270 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 RPS29P25-201ENST00000481709 171 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 MTCYBP18-201ENST00000501056 747 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AF213884.2-201ENST00000510417 903 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 RNU2-69P-201ENST00000516061 100 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-703P-201ENST00000516946 107 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AC122108.2-201ENST00000611946 526 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 AL359547.2-201ENST00000615810 418 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 MIR203B-201ENST00000636080 86 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 U6.99-201ENST00000637524 83 ntBASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
TRIM49D1C9J1S8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
TRIM49D1C9J1S8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.09
TRIM49D1C9J1S8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 Y_RNA.6-201ENST00000362350 114 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 RNU6-522P-201ENST00000364497 107 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 Y_RNA.248-201ENST00000364501 109 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 AL133475.1-201ENST00000404414 305 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 FCF1P9-201ENST00000412546 282 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 Z98742.3-201ENST00000418637 326 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 OOSP1P1-201ENST00000423265 274 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 RPS15AP5-201ENST00000436276 388 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 AL121601.2-201ENST00000438019 707 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 MTND3P16-201ENST00000452205 344 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 AC083904.1-201ENST00000487828 231 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 MTAPP1-201ENST00000489154 819 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 ANXA2P1-201ENST00000505539 926 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 RNU1-41P-201ENST00000516161 162 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 RNU1-48P-201ENST00000516400 162 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 RNA5SP291-201ENST00000517222 105 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 MIR548AC-201ENST00000585049 88 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 AC104458.1-201ENST00000608243 463 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 MIR1321-201ENST00000637766 79 ntBASIC1.96□□□□□ -2.1
TRIM49D1C9J1S8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 RNU6-1252P-201ENST00000363054 104 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 RNU6-1322P-201ENST00000364309 107 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 Y_RNA.295-201ENST00000364918 102 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 SNORA70B-201ENST00000384210 135 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms