Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC080013.3-201ENST00000606839 578 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AL589743.7-201ENST00000612637 233 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC073308.1-201ENST00000623696 305 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AF246928.1-201ENST00000623768 87 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 RNU6-511P-201ENST00000363496 107 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 SNORA68.1-201ENST00000364537 132 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 MIR1197-201ENST00000408818 88 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 RN7SKP266-201ENST00000410232 287 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 OR6C66P-201ENST00000414917 930 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 MED14P1-201ENST00000430517 648 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 RPL23AP30-201ENST00000432419 501 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AC010631.1-201ENST00000474150 156 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 SNORA31.3-201ENST00000516029 96 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 RNU2-10P-201ENST00000516375 211 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 RNU6-143P-201ENST00000516942 93 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 CBX3P7-201ENST00000532876 502 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AL359212.1-201ENST00000556608 614 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AF038458.1-201ENST00000588406 262 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AC234772.3-201ENST00000602277 528 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AL355877.2-201ENST00000603670 358 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 BNIP3P9-201ENST00000603714 553 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AL359547.2-201ENST00000615810 418 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AC009159.2-201ENST00000617603 606 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 AL607023.1-201ENST00000620045 248 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 FRG1KP-201ENST00000623592 341 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 SCARNA4-202ENST00000625402 129 ntBASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.26
COL6A6A6NMZ7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 MTND4P16-201ENST00000466108 1367 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 RNU6-270P-201ENST00000364131 105 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 RNU6-395P-201ENST00000365662 106 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 U8.14-201ENST00000390843 143 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 RNU6-955P-201ENST00000410497 104 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 RPS25P9-201ENST00000435591 252 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 RPS29P28-201ENST00000446439 141 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC010587.1-201ENST00000505809 469 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AF213884.2-201ENST00000510417 903 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 MIR892C-201ENST00000516410 77 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 RNU6-567P-201ENST00000516746 107 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC090572.1-201ENST00000519251 160 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC010186.2-204ENST00000537668 439 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC093012.1-202ENST00000549403 582 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AP001981.2-201ENST00000603241 418 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC093424.1-201ENST00000604999 338 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC122133.1-201ENST00000613964 233 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC092140.2-201ENST00000618027 521 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AL162373.1-201ENST00000620433 407 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 Z75746.1-201ENST00000440243 2080 ntBASIC0.9□□□□□ -2.27
COL6A6A6NMZ7 ELL2P3-201ENST00000457883 1602 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 CISD1P1-201ENST00000393907 327 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 FCF1P10-201ENST00000407590 479 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 PIGPP2-201ENST00000411569 458 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 EDDM3CP-201ENST00000415977 425 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MTCYBP39-201ENST00000437562 491 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MRPS17P3-201ENST00000465453 385 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC117503.1-201ENST00000472241 394 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC104806.1-201ENST00000508720 308 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC093809.1-201ENST00000509155 340 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MTND5P13-201ENST00000513046 1079 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 RN7SKP287-201ENST00000516546 266 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 RNU5B-3P-201ENST00000516601 115 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MTCO2P4-201ENST00000517968 247 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC009902.1-201ENST00000519351 183 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MTND4LP18-201ENST00000526864 291 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AP003181.2-201ENST00000528941 181 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC118273.2-201ENST00000532092 465 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AGGF1P5-201ENST00000567900 919 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AL391840.1-201ENST00000571144 367 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MIR3118-1-201ENST00000581787 76 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC078899.2-201ENST00000595282 212 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC087045.1-201ENST00000605856 382 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MIR15A-201ENST00000607334 83 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms