Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 RNU6-1151P-201ENST00000384684 107 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 RN7SKP266-201ENST00000410232 287 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 RNU2-47P-201ENST00000410649 186 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 MOB1AP2-201ENST00000446060 614 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 RPS27AP8-201ENST00000452665 445 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 AL162395.1-201ENST00000457882 422 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 AC011406.1-201ENST00000512440 370 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 MTCYBP43-201ENST00000513621 740 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 AL132657.2-201ENST00000564417 358 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 MIR4305-201ENST00000583252 102 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 BNIP3P31-201ENST00000604515 566 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 AL139344.1-201ENST00000605228 195 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 AL357075.2-201ENST00000614906 189 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 uc_338.34-201ENST00000617467 174 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 7SK.10-201ENST00000621414 298 ntBASIC-0.52□□□□□ -2.49
LINC01549A6NIU2 CASC19-280ENST00000642102 1351 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 SNORD3E-201ENST00000362899 217 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 RNA5SP259-201ENST00000365541 109 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 RPS15AP9-201ENST00000439856 381 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 NFU1P2-201ENST00000448700 469 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 HMGN3P1-201ENST00000453847 193 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 U7.7-201ENST00000459276 60 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 AC093767.1-201ENST00000504523 156 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 RNU6-678P-201ENST00000516832 109 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 LSM6P2-201ENST00000552208 177 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 AC104229.1-201ENST00000561364 255 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 AL590229.1-201ENST00000603497 542 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 AL031281.1-201ENST00000604049 488 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 AC104408.1-201ENST00000605241 170 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 AC008133.2-201ENST00000624540 351 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 SNORD3E-202ENST00000627253 216 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 MIR1295B-201ENST00000636144 60 ntBASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.53□□□□□ -2.49
LINC01549A6NIU2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 RNA5SP128-201ENST00000365305 116 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 RNU6-952P-201ENST00000391164 108 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 AC073261.1-201ENST00000429409 121 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 AL392003.1-201ENST00000434394 243 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 AP003066.2-201ENST00000529375 555 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 AC022523.2-201ENST00000561045 150 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 AC093249.1-201ENST00000567049 203 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 AC011195.1-201ENST00000578177 177 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 RNU4-5P-201ENST00000607255 135 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 AC084824.4-201ENST00000620106 731 ntBASIC-0.54□□□□□ -2.5
LINC01549A6NIU2 AC027514.1-201ENST00000588561 1603 ntBASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 RNU6-815P-201ENST00000384080 113 ntBASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 RNU6-331P-201ENST00000384724 107 ntBASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 AL355796.1-201ENST00000406706 323 ntBASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 AC116347.2-201ENST00000514912 523 ntBASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 MIR98-201ENST00000606724 119 ntBASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 AC091925.1-201ENST00000623204 462 ntBASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 AP003072.5-201ENST00000623872 773 ntBASIC-0.55□□□□□ -2.5
LINC01549A6NIU2 RNU6-152P-201ENST00000384037 107 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 MIR520F-201ENST00000384824 87 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 AL606489.2-201ENST00000433886 234 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 RNU7-90P-201ENST00000459216 62 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 RNU7-21P-201ENST00000459430 62 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 SNORA40.12-201ENST00000516329 111 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 AC012065.4-201ENST00000602445 679 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 SNRPGP20-201ENST00000604477 205 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 RNU6-91P-201ENST00000607774 107 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 AC239868.4-201ENST00000608318 671 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 AL390237.1-201ENST00000404226 1415 ntBASIC-0.56□□□□□ -2.5
LINC01549A6NIU2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.57□□□□□ -2.5
LINC01549A6NIU2 SNORD114-6-201ENST00000364393 72 ntBASIC-0.57□□□□□ -2.5
LINC01549A6NIU2 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.57□□□□□ -2.5
LINC01549A6NIU2 AL121978.1-201ENST00000402778 359 ntBASIC-0.57□□□□□ -2.5
LINC01549A6NIU2 RNU6-177P-201ENST00000411257 104 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms