Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.07□□□□□ -2.4
CNOT1A5YKK6 ISCA1P1-201ENST00000426679 387 ntBASIC0.07□□□□□ -2.4
CNOT1A5YKK6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.07□□□□□ -2.4
CNOT1A5YKK6 RPS26P45-201ENST00000471748 340 ntBASIC0.07□□□□□ -2.4
CNOT1A5YKK6 AC084024.2-201ENST00000503480 791 ntBASIC0.07□□□□□ -2.4
CNOT1A5YKK6 PDCD5P2-201ENST00000507570 312 ntBASIC0.07□□□□□ -2.4
CNOT1A5YKK6 AL355297.3-201ENST00000604082 446 ntBASIC0.07□□□□□ -2.4
CNOT1A5YKK6 RNU4-5P-201ENST00000607255 135 ntBASIC0.07□□□□□ -2.4
CNOT1A5YKK6 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.07□□□□□ -2.4
CNOT1A5YKK6 Y_RNA.65-201ENST00000362846 100 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.06□□□□□ -2.4
CNOT1A5YKK6 RNU6-348P-201ENST00000384386 107 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 RNU6-110P-201ENST00000384508 104 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 MIR597-201ENST00000384968 97 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 AC104651.1-201ENST00000427559 735 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.06□□□□□ -2.4
CNOT1A5YKK6 SCARNA15.2-201ENST00000516409 127 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.06□□□□□ -2.4
CNOT1A5YKK6 RNU5A-1-201ENST00000362698 116 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 SNORD115-41-201ENST00000363608 82 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 Y_RNA.583-201ENST00000391033 113 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 AL161935.2-201ENST00000414627 60 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.06□□□□□ -2.4
CNOT1A5YKK6 ROCK1P1-201ENST00000573767 549 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.06□□□□□ -2.4
CNOT1A5YKK6 AC069304.2-201ENST00000605154 435 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
CNOT1A5YKK6 AC023934.1-201ENST00000574529 2389 ntBASIC0.06□□□□□ -2.4
CNOT1A5YKK6 AC090625.1-201ENST00000357130 210 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
CNOT1A5YKK6 Y_RNA.495-201ENST00000384435 112 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.05□□□□□ -2.4
CNOT1A5YKK6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.05□□□□□ -2.4
CNOT1A5YKK6 AC244505.3-201ENST00000454598 187 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 RPL7P43-201ENST00000478876 753 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 PTP4A1P4-201ENST00000512479 322 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 RNU6-197P-201ENST00000516680 100 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CNOT1A5YKK6 AC009712.1-201ENST00000564938 316 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 AL583856.2-201ENST00000606298 543 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 AC100810.6-201ENST00000638068 285 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 Y_RNA.375-201ENST00000365625 101 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 RNU6-360P-201ENST00000390944 104 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 AC119751.3-201ENST00000399720 670 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 RPL22P18-201ENST00000417197 377 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 AL049874.1-201ENST00000489560 388 ntBASIC0.05□□□□□ -2.4
CNOT1A5YKK6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.05□□□□□ -2.4
CNOT1A5YKK6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.05□□□□□ -2.4
CNOT1A5YKK6 RNU6-439P-201ENST00000384188 106 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AC104073.1-201ENST00000451988 151 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AC108740.1-201ENST00000498629 225 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 SNORA31.4-201ENST00000516049 129 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AP000860.1-201ENST00000605250 559 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AL355802.4-201ENST00000607635 548 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AC092106.3-201ENST00000611308 722 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.04□□□□□ -2.4
CNOT1A5YKK6 MIR6516-201ENST00000630554 81 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AL138713.1-201ENST00000624026 2130 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 MIR601-201ENST00000385256 79 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 SNORD99-201ENST00000408612 74 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 RNU6-1054P-201ENST00000411293 104 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.04□□□□□ -2.4
CNOT1A5YKK6 GAPDHP17-201ENST00000449858 1001 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.04□□□□□ -2.4
CNOT1A5YKK6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AC027104.1-201ENST00000563702 681 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.04□□□□□ -2.4
CNOT1A5YKK6 AL590240.4-201ENST00000616908 390 ntBASIC0.04□□□□□ -2.4
CNOT1A5YKK6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
CNOT1A5YKK6 AL512637.2-201ENST00000431287 1256 ntBASIC0.03□□□□□ -2.4
CNOT1A5YKK6 AC099677.2-201ENST00000436385 175 ntBASIC0.03□□□□□ -2.4
CNOT1A5YKK6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.03□□□□□ -2.4
CNOT1A5YKK6 AC113420.1-201ENST00000507903 571 ntBASIC0.03□□□□□ -2.4
CNOT1A5YKK6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.03□□□□□ -2.4
CNOT1A5YKK6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.03□□□□□ -2.4
CNOT1A5YKK6 RNU6-91P-201ENST00000607774 107 ntBASIC0.03□□□□□ -2.4
CNOT1A5YKK6 U2.21-201ENST00000637295 81 ntBASIC0.03□□□□□ -2.4
CNOT1A5YKK6 RNU6-140P-201ENST00000384566 108 ntBASIC0.03□□□□□ -2.41
CNOT1A5YKK6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.03□□□□□ -2.41
CNOT1A5YKK6 AL353691.1-201ENST00000451332 387 ntBASIC0.03□□□□□ -2.41
CNOT1A5YKK6 SCARNA8-201ENST00000515924 131 ntBASIC0.03□□□□□ -2.41
CNOT1A5YKK6 AC022616.8-201ENST00000533569 253 ntBASIC0.03□□□□□ -2.41
CNOT1A5YKK6 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.03□□□□□ -2.41
CNOT1A5YKK6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.03□□□□□ -2.41
CNOT1A5YKK6 AC091805.2-201ENST00000603848 235 ntBASIC0.03□□□□□ -2.41
CNOT1A5YKK6 KATNBL1P5-201ENST00000605015 517 ntBASIC0.03□□□□□ -2.41
CNOT1A5YKK6 BX284668.6-201ENST00000606899 438 ntBASIC0.03□□□□□ -2.41
CNOT1A5YKK6 AC073968.1-201ENST00000618594 637 ntBASIC0.03□□□□□ -2.41
CNOT1A5YKK6 AC011155.2-201ENST00000623202 216 ntBASIC0.03□□□□□ -2.41
CNOT1A5YKK6 AC112487.2-201ENST00000637950 304 ntBASIC0.03□□□□□ -2.41
CNOT1A5YKK6 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.03□□□□□ -2.41
CNOT1A5YKK6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
CNOT1A5YKK6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.02□□□□□ -2.41
CNOT1A5YKK6 FAM204CP-201ENST00000424489 642 ntBASIC0.02□□□□□ -2.41
CNOT1A5YKK6 HMGN2P22-201ENST00000427588 175 ntBASIC0.02□□□□□ -2.41
CNOT1A5YKK6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms