Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 SUMO2P12-201ENST00000405924 140 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 MIR1323-201ENST00000408090 73 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 MIR1283-2-201ENST00000408621 87 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 RNU6-174P-201ENST00000410406 106 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 RNU2-23P-201ENST00000410545 195 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 RNU2-48P-201ENST00000410694 191 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 POLHP1-201ENST00000411806 470 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLRN2A0PK11 AL589872.1-201ENST00000426602 288 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.92□□□□□ -2.1
CLRN2A0PK11 AL512286.1-201ENST00000439244 400 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 Z73417.1-201ENST00000447373 778 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 SNRPFP4-201ENST00000456366 242 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 PRELID3BP1-201ENST00000457142 540 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CLRN2A0PK11 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.92□□□□□ -2.1
CLRN2A0PK11 SNORA31.23-201ENST00000517219 133 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.92□□□□□ -2.1
CLRN2A0PK11 MIR5697-201ENST00000578045 78 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 MIR3618-201ENST00000580330 88 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
CLRN2A0PK11 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.92□□□□□ -2.1
CLRN2A0PK11 SEPT7P9-203ENST00000604116 343 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 AL031775.1-201ENST00000607014 887 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLRN2A0PK11 FARSBP1-201ENST00000435808 1778 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 Y_RNA.327-201ENST00000365201 102 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 SNORD14D-201ENST00000384390 87 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 SNORD115.1-201ENST00000391109 76 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 CBX3P9-201ENST00000402326 552 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 MIR1262-201ENST00000408276 93 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 RNA5SP390-201ENST00000410191 113 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.91□□□□□ -2.1
CLRN2A0PK11 RPL22P18-201ENST00000417197 377 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 C1DP2-201ENST00000418167 426 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.91□□□□□ -2.1
CLRN2A0PK11 PGBD4P6-201ENST00000421501 610 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC009474.2-201ENST00000451383 136 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.91□□□□□ -2.1
CLRN2A0PK11 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.91□□□□□ -2.1
CLRN2A0PK11 ZNF114P1-201ENST00000453500 292 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 SNORD11.1-201ENST00000459482 85 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.91□□□□□ -2.1
CLRN2A0PK11 AP001025.1-201ENST00000486139 332 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 PTP4A1P4-201ENST00000512479 322 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC022616.8-201ENST00000533569 253 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC090897.2-201ENST00000581715 130 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 AL353778.1-201ENST00000603149 408 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 AL136370.1-201ENST00000608166 691 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC027449.1-201ENST00000608890 407 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC012409.4-201ENST00000612923 249 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 AC104010.1-201ENST00000616889 150 ntBASIC1.91□□□□□ -2.1
CLRN2A0PK11 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CLRN2A0PK11 Y_RNA.608-201ENST00000410647 95 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 RN7SKP101-201ENST00000411376 320 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 AL513185.2-201ENST00000425543 193 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 AL136380.1-201ENST00000447970 162 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 SNORA3.4-201ENST00000515969 96 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 Y_RNA.687-201ENST00000516558 91 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 RNA5SP490-201ENST00000517141 136 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 RN7SKP256-201ENST00000517201 314 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 MTND2P32-201ENST00000521584 1038 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.9□□□□□ -2.11
CLRN2A0PK11 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.9□□□□□ -2.11
CLRN2A0PK11 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.9□□□□□ -2.11
CLRN2A0PK11 MIR4713-201ENST00000582691 75 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 U1.36-201ENST00000620684 176 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 AC007792.1-201ENST00000623023 402 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.9□□□□□ -2.11
CLRN2A0PK11 AC027514.1-201ENST00000588561 1603 ntBASIC1.9□□□□□ -2.11
CLRN2A0PK11 MIR29B2-201ENST00000385055 81 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 SNORA67.6-201ENST00000391093 99 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 RPS3AP36-201ENST00000398190 775 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 RNU2-39P-201ENST00000410604 198 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.89□□□□□ -2.11
CLRN2A0PK11 SRIP3-201ENST00000413200 219 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 AC011233.1-201ENST00000422812 283 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 EIF4EP2-201ENST00000422816 654 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.89□□□□□ -2.11
CLRN2A0PK11 USP9YP18-201ENST00000425912 695 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.89□□□□□ -2.11
CLRN2A0PK11 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.89□□□□□ -2.11
CLRN2A0PK11 snoU13.18-201ENST00000459483 104 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 AC117522.1-201ENST00000509821 380 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.89□□□□□ -2.11
CLRN2A0PK11 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.89□□□□□ -2.11
CLRN2A0PK11 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.89□□□□□ -2.11
CLRN2A0PK11 AL139286.2-201ENST00000606838 396 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 AL132822.1-201ENST00000617063 513 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 AC099842.1-201ENST00000619919 596 ntBASIC1.89□□□□□ -2.11
CLRN2A0PK11 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms