Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNA5SP168-201ENST00000516642 112 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AL133153.1-201ENST00000557756 303 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 CYP4A27P-201ENST00000567218 190 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC022022.2-201ENST00000602989 360 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AL359821.1-201ENST00000605519 182 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 snoU13.31-201ENST00000607291 104 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC107982.1-201ENST00000507171 1300 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC010615.1-201ENST00000594254 1764 ntBASIC0.34□□□□□ -2.35
TCRBV3S1A0A5B6 RNA5SP361-201ENST00000362686 118 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 SNORA63D-201ENST00000364359 132 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 EBAG9P1-201ENST00000418955 543 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 RAC1P6-201ENST00000423911 575 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 RPS15AP10-201ENST00000432472 382 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AL078601.1-201ENST00000444542 271 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 HMGB1P28-201ENST00000507778 552 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 RNU5A-4P-201ENST00000516588 111 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AC090142.3-201ENST00000519012 385 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 HIGD1AP17-201ENST00000554576 276 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AC008015.1-201ENST00000555505 465 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 BNIP3P31-201ENST00000604515 566 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AC100814.1-201ENST00000606963 623 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AL451064.1-201ENST00000607718 471 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AC092656.1-203ENST00000624134 423 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 AC233981.2-201ENST00000611524 1614 ntBASIC0.34□□□□□ -2.36
TCRBV3S1A0A5B6 MTND4P21-201ENST00000453886 1357 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 Y_RNA.124-201ENST00000363339 93 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 U6.112-201ENST00000384129 70 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-17P-201ENST00000384245 107 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-18P-201ENST00000384527 107 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-331P-201ENST00000384724 107 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 CETN4P-201ENST00000432407 469 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 AC002429.1-201ENST00000437672 148 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 MTND5P14-201ENST00000441481 1267 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 RPL39P36-201ENST00000490784 156 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-583P-201ENST00000516012 92 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 AL512605.2-201ENST00000592972 256 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 AL590229.1-201ENST00000603497 542 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 AL356094.1-201ENST00000624663 1212 ntBASIC0.33□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-792P-201ENST00000363490 107 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-707P-201ENST00000364647 95 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 RNU1-93P-201ENST00000364704 169 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 FGF7P8-201ENST00000402994 292 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 TXNL1P1-201ENST00000429528 554 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AC114878.1-201ENST00000441166 358 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 ELOCP30-201ENST00000447108 299 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 snoU13.30-201ENST00000458951 104 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 MTND1P16-201ENST00000465177 898 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AC026414.1-201ENST00000504046 698 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-551P-201ENST00000516661 103 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AC091163.3-201ENST00000518269 1144 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 CR383656.8-201ENST00000549046 145 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AC109446.2-201ENST00000567872 497 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 VN1R82P-201ENST00000601481 356 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AL159153.1-201ENST00000619688 317 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TCRBV3S1A0A5B6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-1176P-201ENST00000390955 107 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 AP000275.1-201ENST00000411943 390 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 DPRXP1-201ENST00000426312 460 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 AC005094.1-201ENST00000440420 368 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 TOMM22P6-201ENST00000465035 409 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms