Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNA5SP82-201ENST00000516707 92 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 RN7SKP219-201ENST00000516825 296 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-548P-201ENST00000517083 115 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 AP004607.1-201ENST00000524456 203 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 MTATP6P3-201ENST00000581686 676 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 AP001596.2-201ENST00000608410 312 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 Z75746.1-201ENST00000440243 2080 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC131280.1-202ENST00000624067 4211 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AL139276.1-201ENST00000311910 1001 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 OR4G2P-201ENST00000328113 903 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-858P-201ENST00000362436 107 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-1103P-201ENST00000384150 107 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-1127P-201ENST00000384580 107 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 SNORA16.2-201ENST00000390991 127 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 RNU4-46P-201ENST00000410818 138 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC073464.1-201ENST00000429823 534 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AL031659.1-201ENST00000447075 539 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 MTCO2P18-201ENST00000457151 658 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC022364.2-201ENST00000457963 554 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC073901.1-201ENST00000462471 408 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC079804.2-201ENST00000490376 200 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 RPS29P11-201ENST00000496507 171 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 MTND2P33-201ENST00000506452 1031 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 OR5AQ1P-201ENST00000527596 927 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC079598.5-201ENST00000547460 117 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC009127.3-201ENST00000570531 403 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 NBR2-204ENST00000587322 63 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC087683.1-201ENST00000591187 441 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 RPS15AP11-201ENST00000594193 385 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AC245008.1-201ENST00000608123 476 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 U6.42-201ENST00000618440 107 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SMIM28A0A1B0GU29 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-552P-201ENST00000362869 119 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-486P-201ENST00000363116 107 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 Y_RNA.582-201ENST00000391023 95 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 RNA5SP338-201ENST00000410495 85 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 RNU2-66P-201ENST00000410650 161 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 MTCYBP8-201ENST00000422855 651 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC090515.1-201ENST00000465295 476 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 RPS3AP17-201ENST00000472594 777 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 RPL36AP48-201ENST00000485521 314 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AP001025.1-201ENST00000486139 332 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 HMGB1P30-201ENST00000492455 606 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC104564.1-201ENST00000493028 407 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 HMGB1P29-201ENST00000505659 499 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 MTCO3P7-201ENST00000510008 774 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 RNA5SP112-201ENST00000515937 99 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 CBX3P7-201ENST00000532876 502 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC136619.2-201ENST00000563361 631 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 MYL12BP1-201ENST00000569826 507 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 MIR5571-201ENST00000577998 113 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 MIR5692A1-201ENST00000580523 69 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC123912.5-201ENST00000605470 343 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC008945.2-201ENST00000606056 604 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC080013.6-201ENST00000606185 215 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC008536.2-201ENST00000607284 349 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC069294.1-201ENST00000608397 350 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC009233.1-201ENST00000616477 371 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC048344.4-201ENST00000619744 527 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 SCARNA4-202ENST00000625402 129 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 AL354685.2-201ENST00000448218 1447 ntBASIC1.98□□□□□ -2.09
SMIM28A0A1B0GU29 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-1120P-201ENST00000362988 108 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 RNA5SP99-201ENST00000364020 114 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 RNU4-75P-201ENST00000364621 146 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms