Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 MTCO2P25-201ENST00000447065 681 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AL353752.1-201ENST00000454946 260 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 TAF9P2-201ENST00000454958 515 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC108729.2-201ENST00000476543 840 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC074344.1-201ENST00000512823 224 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU5A-4P-201ENST00000516588 111 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 RNA5SP481-201ENST00000516814 122 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC090142.3-201ENST00000519012 385 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC023538.1-201ENST00000534576 736 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 BNIP3P16-201ENST00000589779 534 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC022432.1-201ENST00000595739 310 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 BNIP3P30-201ENST00000601184 574 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 BNIP3P31-201ENST00000604515 566 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC090578.1-201ENST00000604955 591 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC009229.3-201ENST00000608056 282 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 MIR6788-201ENST00000618842 66 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 Y_RNA.4-201ENST00000362333 112 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU6-858P-201ENST00000362436 107 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 RNA5SP347-201ENST00000362445 119 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 RNA5SP499-201ENST00000363982 119 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU6-952P-201ENST00000391164 108 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 AL356776.1-201ENST00000406574 447 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 Y_RNA.597-201ENST00000410463 100 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 UBE2V1P10-201ENST00000414685 269 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 AC027644.1-201ENST00000419595 298 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 BET1P1-201ENST00000482276 359 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 COX6CP6-201ENST00000490840 228 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 SNORA31.19-201ENST00000517079 126 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 AC023632.1-201ENST00000518463 375 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 AC022022.2-201ENST00000602989 360 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.33□□□□□ -2.36
TRAV12-3A0A0B4J271 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 Y_RNA.332-201ENST00000365271 113 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU6-622P-201ENST00000384272 103 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 AL359634.1-202ENST00000404721 284 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 AC098934.3-201ENST00000430450 190 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 MRPL42P4-201ENST00000453267 443 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU4-54P-201ENST00000516428 129 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 RNA5SP168-201ENST00000516642 112 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU6-165P-201ENST00000517170 99 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 AC078795.2-201ENST00000602835 1252 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 RMST_4.1-201ENST00000616886 107 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 AC010615.1-201ENST00000594254 1764 ntBASIC0.32□□□□□ -2.36
TRAV12-3A0A0B4J271 OR4G2P-201ENST00000328113 903 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 RNA5SP361-201ENST00000362686 118 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU6-481P-201ENST00000384194 107 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 MIR10B-201ENST00000385011 110 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 SNORA40C-201ENST00000391285 128 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU2-23P-201ENST00000410545 195 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU2-7P-201ENST00000410794 178 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 RPS3AP1-201ENST00000413190 320 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 RPS15AP10-201ENST00000432472 382 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 AC092628.1-201ENST00000436250 252 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 SNRPEP7-201ENST00000438350 220 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 GXYLT1P1-201ENST00000446657 490 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 RNU7-136P-201ENST00000458819 69 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 MTND1P16-201ENST00000465177 898 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 SNORA76.2-201ENST00000517095 137 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 OR6C7P-201ENST00000547875 934 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 MIR151B-201ENST00000584249 96 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 AL590229.1-201ENST00000603497 542 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 AC107304.1-201ENST00000604229 296 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 AC092656.1-203ENST00000624134 423 ntBASIC0.31□□□□□ -2.36
TRAV12-3A0A0B4J271 snoU2_19.1-201ENST00000362361 80 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms