Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MIR4293-201ENST00000584305 78 ntBASIC0.96□□□□□ -2.26
SCN10AQ9Y5Y9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
SCN10AQ9Y5Y9 MTND5P9-201ENST00000503854 1755 ntBASIC0.96□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6-414P-201ENST00000363705 104 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6-609P-201ENST00000365459 107 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6-701P-201ENST00000384059 107 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 MIR625-201ENST00000385047 85 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 MIR936-201ENST00000401264 98 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 AL079342.2-201ENST00000403367 482 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 RNU2-36P-201ENST00000410361 191 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 RNU2-41P-201ENST00000410991 178 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 SNRPEP7-201ENST00000438350 220 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 PAXBP1P1-201ENST00000449315 447 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 MTCYBP40-201ENST00000509390 1135 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 RNU2-53P-201ENST00000516257 147 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6-1225P-201ENST00000516336 65 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6-902P-201ENST00000517212 91 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 AP003476.1-201ENST00000623984 516 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 AP003485.1-201ENST00000625093 753 ntBASIC0.95□□□□□ -2.26
SCN10AQ9Y5Y9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 RNA5SP62-201ENST00000363457 110 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 MIR29B2-201ENST00000385055 81 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC104651.1-201ENST00000427559 735 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 snoU13.14-201ENST00000459372 104 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 DEFB108A-201ENST00000530110 222 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AP000763.2-201ENST00000540641 163 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC012414.6-201ENST00000568241 401 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 BNIP3P27-201ENST00000599991 412 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC099654.9-201ENST00000637055 678 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 MIR1197-201ENST00000408818 88 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 RNU2-7P-201ENST00000410794 178 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 MTCO1P44-201ENST00000441935 243 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 MTCYBP42-201ENST00000444653 1130 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AL583843.1-201ENST00000456070 346 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC104072.1-201ENST00000568817 668 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AL512605.2-201ENST00000592972 256 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC098483.2-201ENST00000603158 454 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AP001981.2-201ENST00000603241 418 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC174048.1-201ENST00000603389 144 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 AC112191.3-201ENST00000604371 277 ntBASIC0.94□□□□□ -2.26
SCN10AQ9Y5Y9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 snoZ40.1-201ENST00000364540 72 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 Y_RNA.311-201ENST00000365068 96 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 Y_RNA.408-201ENST00000383987 102 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 MIR216A-201ENST00000385063 110 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 BTF3L4P2-201ENST00000392798 346 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 RAC1P6-201ENST00000423911 575 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 AL022238.1-201ENST00000442557 355 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 AL353718.1-201ENST00000451028 517 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 RPL30P6-201ENST00000475925 342 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 RNA5SP216-201ENST00000516111 123 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6-1315P-201ENST00000517187 99 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 VN1R87P-201ENST00000596706 487 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 AC021171.1-201ENST00000603137 706 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 AL355802.3-201ENST00000607571 545 ntBASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.93□□□□□ -2.26
SCN10AQ9Y5Y9 ZNF29P-201ENST00000225587 168 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 MIR330-201ENST00000362196 94 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AL591212.2-201ENST00000433923 257 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 RSL24D1P8-201ENST00000434442 492 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6-1132P-201ENST00000459214 107 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC108729.1-201ENST00000487812 947 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 RPS23P4-201ENST00000487908 423 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC105313.1-201ENST00000509121 353 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC025465.3-201ENST00000510570 311 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 DEFB130C-202ENST00000530001 230 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AL136520.1-202ENST00000555494 763 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AL590095.2-201ENST00000604136 117 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 RPL21P136-201ENST00000605378 396 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC008993.2-201ENST00000631744 806 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6-289P-201ENST00000364093 107 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 232 ms