Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 RPL23AP49-201ENST00000492925 468 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AC007458.1-201ENST00000542812 373 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AC109446.1-201ENST00000566172 220 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AC009163.5-201ENST00000575421 637 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 MIR2682-201ENST00000580305 110 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 MIR3976-201ENST00000606807 139 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AC084757.4-201ENST00000616350 526 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AL049781.1-201ENST00000623195 3585 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 Z83843.1-201ENST00000604070 3685 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 SNORA63-201ENST00000363450 132 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-474P-201ENST00000384243 107 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 MIR548P-201ENST00000408336 84 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AC074117.2-201ENST00000417130 397 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AL161651.1-201ENST00000440882 223 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 RPS12P18-201ENST00000442381 270 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AL031183.1-201ENST00000457667 207 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.631-201ENST00000459607 101 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 RN7SL75P-201ENST00000461926 281 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 RPS29P27-201ENST00000463711 170 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 RNA5SP384-201ENST00000516615 116 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 SNORA31.18-201ENST00000517043 134 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 RNA5SP380-201ENST00000517190 98 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 SNRPGP17-201ENST00000603780 214 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AC073657.2-201ENST00000605661 303 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AC012314.7-201ENST00000619693 93 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AC092608.2-201ENST00000624427 218 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 HAUS6P2-201ENST00000433254 2404 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 AL079305.1-201ENST00000623159 3008 ntBASIC3.35□□□□□ -1.87
PCDHA3Q9Y5H8 MAPK10-322ENST00000641485 4530 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 AC004944.1-201ENST00000517807 3059 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-227P-201ENST00000362865 103 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.112-201ENST00000363250 102 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-843P-201ENST00000384454 104 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-331P-201ENST00000384724 107 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 SNORA46-201ENST00000384762 135 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 MIR559-201ENST00000385188 96 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 AP000275.1-201ENST00000411943 390 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 AC096649.2-201ENST00000416186 393 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 Z82205.1-201ENST00000428456 297 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 AC011816.1-201ENST00000441346 546 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 MED28P2-201ENST00000475771 317 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-976P-201ENST00000516086 111 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 ACA59.2-201ENST00000517061 156 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-711P-201ENST00000517255 106 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 MIR4273-201ENST00000582824 84 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 AC107294.3-201ENST00000609211 526 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.812-201ENST00000610788 101 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.784-201ENST00000613803 101 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.787-201ENST00000616522 101 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.780-201ENST00000617336 101 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.801-201ENST00000619005 101 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 uc_338.22-201ENST00000622722 187 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 MIR3529-201ENST00000637713 78 ntBASIC3.34□□□□□ -1.87
PCDHA3Q9Y5H8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.88
PCDHA3Q9Y5H8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
PCDHA3Q9Y5H8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 Y_RNA.326-201ENST00000365176 113 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-487P-201ENST00000365430 104 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 MIR521-1-201ENST00000384902 87 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-750P-201ENST00000390946 107 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 EIF4EP2-201ENST00000422816 654 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 AL137792.2-201ENST00000443484 235 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 RPL7P49-201ENST00000471402 708 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms