Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 MIR3128-201ENST00000581957 66 ntBASIC3.79□□□□□ -1.8
PCDHB4Q9Y5E5 AC096772.1-201ENST00000609146 564 ntBASIC3.79□□□□□ -1.8
PCDHB4Q9Y5E5 AC118273.1-201ENST00000525324 3006 ntBASIC3.79□□□□□ -1.8
PCDHB4Q9Y5E5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHB4Q9Y5E5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB4Q9Y5E5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHB4Q9Y5E5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PCDHB4Q9Y5E5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHB4Q9Y5E5 Z75746.1-201ENST00000440243 2080 ntBASIC3.79□□□□□ -1.8
PCDHB4Q9Y5E5 AP001148.1-201ENST00000624124 2359 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 RNU6-105P-201ENST00000363909 104 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 Y_RNA.405-201ENST00000383979 100 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 Y_RNA.451-201ENST00000384200 100 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 Y_RNA.518-201ENST00000384552 113 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 Y_RNA.524-201ENST00000384564 100 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 Y_RNA.561-201ENST00000384694 100 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 Y_RNA.562-201ENST00000384695 113 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 RNU6-121P-201ENST00000410525 99 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 RN7SKP53-201ENST00000411337 315 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 RPL21P38-201ENST00000418090 167 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AC002075.2-201ENST00000425207 252 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 RPS29P31-201ENST00000446147 164 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AL133547.1-201ENST00000448546 220 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 SNORD105B-201ENST00000458770 79 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AC034236.1-201ENST00000469891 373 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AC025465.3-201ENST00000510570 311 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 RNU6-1183P-201ENST00000517054 60 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AC034105.4-201ENST00000568304 277 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AC104581.2-201ENST00000572227 430 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AC039056.2-201ENST00000622261 511 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AC243829.7-201ENST00000633081 225 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 AC068647.1-201ENST00000489539 2265 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.78□□□□□ -1.8
PCDHB4Q9Y5E5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 Y_RNA.27-201ENST00000362540 103 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 Y_RNA.183-201ENST00000363882 113 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 RNU6-217P-201ENST00000384164 104 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 Y_RNA.477-201ENST00000384352 108 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 U3.37-201ENST00000408528 213 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 SNORA11-201ENST00000408789 128 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 VDAC1P3-201ENST00000434069 851 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 AC005921.1-201ENST00000510589 286 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 RNU6-1023P-201ENST00000516137 106 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 AP006245.1-201ENST00000522549 120 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 AC010186.2-204ENST00000537668 439 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 AC060766.3-201ENST00000591442 263 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 FTX_3.1-201ENST00000610451 147 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 AL034408.1-202ENST00000636088 415 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 U2.21-201ENST00000637295 81 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 AL353746.1-201ENST00000566293 6881 ntBASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB4Q9Y5E5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 Y_RNA.358-201ENST00000365491 99 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 RNU6-658P-201ENST00000384606 106 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 EI24P2-201ENST00000397776 1076 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AP000275.1-201ENST00000411943 390 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 RPL39P38-201ENST00000467018 153 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 RPL23AP14-201ENST00000468281 468 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 RN7SL594P-201ENST00000470590 287 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 TRBVB-201ENST00000477100 408 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AC010469.2-201ENST00000496412 480 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 RNU1-103P-201ENST00000516502 125 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 SNORA43.2-201ENST00000516652 128 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 CASP1P1-201ENST00000526345 212 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AC026333.2-201ENST00000542164 106 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 RPL23AP78-201ENST00000599928 470 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AC022149.2-201ENST00000621061 203 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AC012442.3-202ENST00000636742 206 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 AC009093.8-201ENST00000641769 292 ntBASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PCDHB4Q9Y5E5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
PCDHB4Q9Y5E5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms