Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MIR887-201ENST00000401258 79 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AC009161.1-201ENST00000417306 376 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AL513185.2-201ENST00000425543 193 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 TOMM20P4-201ENST00000427861 435 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 MTCO3P18-201ENST00000440206 761 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AL161651.1-201ENST00000440882 223 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AP000852.1-201ENST00000472460 573 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 SNORA19.2-201ENST00000516013 114 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 RNU6-1069P-201ENST00000516612 133 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AC107953.1-201ENST00000522216 297 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 RNU6-85P-201ENST00000605989 107 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.66□□□□□ -1.98
YIPF1Q9Y548 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
YIPF1Q9Y548 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AC010889.1-201ENST00000566193 2666 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 Y_RNA.100-201ENST00000363141 102 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 RNU1-105P-201ENST00000363470 161 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 RNU6-831P-201ENST00000384548 107 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 MIR767-201ENST00000390228 109 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 RNU6-750P-201ENST00000390946 107 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 MIR450B-201ENST00000401182 78 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 RAP1BP3-201ENST00000407180 549 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AC103975.1-201ENST00000482506 483 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AC079140.5-201ENST00000507882 310 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 RNA5SP24-201ENST00000516478 95 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 RNU6-323P-201ENST00000521915 107 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AC007536.1-201ENST00000533382 349 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 SNORD53-201ENST00000579969 78 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AC011712.1-201ENST00000588959 234 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 RPL23AP78-201ENST00000599928 470 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AL355877.2-201ENST00000603670 358 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 Z69720.2-201ENST00000624755 279 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 AL161431.1-201ENST00000618966 4205 ntBASIC2.65□□□□□ -1.99
YIPF1Q9Y548 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.65□□□□□ -1.99
YIPF1Q9Y548 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AC008669.1-201ENST00000565823 2178 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
YIPF1Q9Y548 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.64□□□□□ -1.99
YIPF1Q9Y548 RNU6-942P-201ENST00000363002 107 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 Y_RNA.88-201ENST00000363029 99 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 RNU6-254P-201ENST00000363377 107 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 Y_RNA.530-201ENST00000384587 101 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 RNA5SP210-201ENST00000391034 120 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AL590004.2-201ENST00000404787 371 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 FTH1P15-201ENST00000406984 280 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.64□□□□□ -1.99
YIPF1Q9Y548 NDUFA5P4-201ENST00000436704 385 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.64□□□□□ -1.99
YIPF1Q9Y548 Z96811.1-201ENST00000445880 108 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 HIGD1AP2-201ENST00000446367 280 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.64□□□□□ -1.99
YIPF1Q9Y548 RNU7-66P-201ENST00000459469 62 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 RPL23AP45-201ENST00000476406 468 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 RPL7P43-201ENST00000478876 753 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AC113155.1-201ENST00000511141 769 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AC008549.1-201ENST00000512900 643 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AC069113.1-201ENST00000517763 267 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 CKS1BP7-201ENST00000522230 235 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 OR1M4P-201ENST00000589199 287 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AC008121.1-201ENST00000603244 268 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AC093913.1-201ENST00000614178 329 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AC009248.2-201ENST00000619826 254 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 RMST_7.1-201ENST00000621935 268 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 AC064859.1-201ENST00000624741 174 ntBASIC2.64□□□□□ -1.99
YIPF1Q9Y548 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
YIPF1Q9Y548 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
YIPF1Q9Y548 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
YIPF1Q9Y548 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
YIPF1Q9Y548 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.63□□□□□ -1.99
YIPF1Q9Y548 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
YIPF1Q9Y548 SNORD113-7-201ENST00000363762 77 ntBASIC2.63□□□□□ -1.99
YIPF1Q9Y548 RNY3P14-201ENST00000384309 102 ntBASIC2.63□□□□□ -1.99
YIPF1Q9Y548 SNORD56-201ENST00000413522 71 ntBASIC2.63□□□□□ -1.99
YIPF1Q9Y548 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.63□□□□□ -1.99
YIPF1Q9Y548 AL096701.2-201ENST00000416920 238 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms