Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 RNU6-1222P-201ENST00000384615 107 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 RPL17P50-201ENST00000396131 546 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 RNU6-1245P-201ENST00000411130 106 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 AC139712.2-201ENST00000424302 339 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 CST2P1-201ENST00000425770 87 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 MTND5P2-201ENST00000442927 1142 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 GDI2P2-201ENST00000445131 608 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 RPL31P58-201ENST00000469001 379 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 RPL30P7-201ENST00000479312 323 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 SNORD60.2-201ENST00000516883 86 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 AC107934.1-201ENST00000522215 217 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 AC087441.2-201ENST00000529141 262 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 MIR5692A1-201ENST00000580523 69 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 AP000484.1-201ENST00000620067 1252 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 AL356266.1-201ENST00000623311 483 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 SCARNA15.3-201ENST00000626315 122 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 SCARNA4.1-201ENST00000628597 123 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 SNORD1A-201ENST00000364968 72 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 MIR520A-201ENST00000384862 85 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 RNU6-360P-201ENST00000390944 104 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 RNU6-757P-201ENST00000410334 100 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 RPL37P10-201ENST00000412884 288 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AC004854.1-201ENST00000440356 349 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 HMGN2P18-201ENST00000450680 270 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 RPL26P26-201ENST00000480251 434 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AC116347.2-201ENST00000514912 523 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AC105185.1-201ENST00000518705 535 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 SNORA77B-201ENST00000578179 125 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 MIR4672-201ENST00000583126 81 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AC245884.10-201ENST00000597355 337 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 SNRPGP19-201ENST00000603826 189 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AC026790.2-201ENST00000606282 430 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AC016597.2-201ENST00000613256 341 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 AC025034.2-201ENST00000623264 286 ntBASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
CHTOPQ9Y3Y2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 MIR449A-201ENST00000362113 91 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 RNU6-78P-201ENST00000362897 107 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 MIR544A-201ENST00000384855 91 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 MIR23A-201ENST00000385245 73 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 MIR618-201ENST00000385287 98 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 RNA5SP111-201ENST00000411386 101 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 MTCO2P8-201ENST00000412213 658 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 C1DP2-201ENST00000418167 426 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AC106883.1-201ENST00000418805 562 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AC123900.1-201ENST00000420390 96 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 RPS27P16-201ENST00000425758 201 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 KATNBL1P3-201ENST00000443475 909 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AL031313.1-201ENST00000448435 256 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 EXOSC3P1-201ENST00000448649 500 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 RPS27AP8-201ENST00000452665 445 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 UBE2V1P12-201ENST00000503954 474 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AC108078.2-201ENST00000510750 236 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AC119751.5-201ENST00000514077 770 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 MIR4509-3-201ENST00000578671 94 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 MIR4509-2-201ENST00000583920 94 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AC069114.2-201ENST00000604699 304 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AL034555.1-201ENST00000604816 211 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AC018889.1-201ENST00000605372 397 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AC092106.3-201ENST00000611308 722 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 MIR4509-1-201ENST00000618224 94 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 AC022960.3-201ENST00000619794 441 ntBASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.28□□□□□ -2.2
CHTOPQ9Y3Y2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.21
CHTOPQ9Y3Y2 MTND5P9-201ENST00000503854 1755 ntBASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 SNORD56.2-201ENST00000363242 71 ntBASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 RNU6-384P-201ENST00000364900 104 ntBASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 RNU6-438P-201ENST00000365561 103 ntBASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 RNU6-636P-201ENST00000384598 107 ntBASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 MIR634-201ENST00000385208 97 ntBASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 RNU6-584P-201ENST00000410350 95 ntBASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 MTCO3P41-201ENST00000414801 328 ntBASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 MTCO2P23-201ENST00000425216 680 ntBASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 MTND1P32-201ENST00000433043 938 ntBASIC1.27□□□□□ -2.21
CHTOPQ9Y3Y2 HSPE1P9-201ENST00000440046 311 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms