Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU6-105P-201ENST00000363909 104 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 Y_RNA.201-201ENST00000364052 96 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 MIR29C-201ENST00000385231 88 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 SNORA11.4-201ENST00000408823 129 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 AL591043.1-201ENST00000432461 424 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 RPS15AP10-201ENST00000432472 382 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 AL353689.1-201ENST00000438895 199 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 RPL39P29-201ENST00000447779 157 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 PMCHL2-203ENST00000457791 237 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 RPL21P99-201ENST00000480369 423 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 DUXAP5-201ENST00000529668 529 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 SNRPGP18-201ENST00000553000 214 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 MIR4703-201ENST00000577728 79 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 NIFKP6-201ENST00000598115 845 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 Z84480.1-201ENST00000605131 311 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 MIR7106-201ENST00000612419 65 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 AC120349.3-201ENST00000624377 529 ntBASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KCNIP3Q9Y2W7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 snoU2_19.1-201ENST00000362361 80 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-181P-201ENST00000363225 107 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-234P-201ENST00000365229 104 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-456P-201ENST00000384493 107 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-1222P-201ENST00000384615 107 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 GSTA9P-201ENST00000406231 611 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 MIR1262-201ENST00000408276 93 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 MIR1283-2-201ENST00000408621 87 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AC096664.2-201ENST00000411843 406 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 BX295541.1-201ENST00000417774 250 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 MTND2P29-201ENST00000438595 412 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 DNAJC19P4-201ENST00000440115 345 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AL031667.1-201ENST00000440222 725 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AC244505.5-201ENST00000443639 207 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 PRELID3BP1-201ENST00000457142 540 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 MTCO2P6-201ENST00000463134 685 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 GMFBP1-201ENST00000467831 427 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 RPS3AP14-201ENST00000483907 780 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 MTND2P33-201ENST00000506452 1031 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-445P-201ENST00000516949 107 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AC109347.2-201ENST00000610220 349 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AC135507.2-201ENST00000612443 309 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 AC009161.2-201ENST00000624626 138 ntBASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
KCNIP3Q9Y2W7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 RNA5SP276-201ENST00000362580 94 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-527P-201ENST00000363425 104 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-1303P-201ENST00000364841 107 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-606P-201ENST00000384721 111 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 SNORA48.7-201ENST00000391302 135 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 SRIP3-201ENST00000413200 219 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 SNORD56-201ENST00000413522 71 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 HMGN2P19-201ENST00000425149 265 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 KATNBL1P3-201ENST00000443475 909 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 RPS3AP12-201ENST00000443616 753 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 MTND1P18-201ENST00000448191 573 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AL109933.2-201ENST00000452651 260 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AL122001.1-201ENST00000457027 370 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 LRRC34P2-201ENST00000514850 553 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AP002963.1-201ENST00000530590 184 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC023050.3-201ENST00000541142 333 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 MIR1254-2-201ENST00000579553 63 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AP001596.2-201ENST00000608410 312 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms