Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU6-166P-201ENST00000384371 107 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 MIR10A-201ENST00000385043 110 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 SNORD73A-201ENST00000386062 65 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.646-201ENST00000410980 101 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AC104332.2-201ENST00000429959 156 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AC107083.1-201ENST00000439643 279 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 MTCO3P10-201ENST00000455912 772 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AC092798.1-201ENST00000458542 409 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 SNORD5.1-201ENST00000458800 75 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AL135752.1-201ENST00000479477 471 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AC090096.1-201ENST00000489168 390 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AC008885.1-201ENST00000514930 301 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-711P-201ENST00000517255 106 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AC104576.1-201ENST00000524225 88 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 UBL5P2-201ENST00000583788 219 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 SNRPGP17-201ENST00000603780 214 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 uc_338.25-201ENST00000613756 156 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AC027309.3-201ENST00000623419 351 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 MTND5P19-201ENST00000424872 1794 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 AL365361.1-201ENST00000566942 3481 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 FTLP6-201ENST00000355274 422 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-37P-201ENST00000362692 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.202-201ENST00000364083 110 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-11P-201ENST00000364234 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-25P-201ENST00000383873 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-1-201ENST00000383898 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-48P-201ENST00000384161 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-36P-201ENST00000384172 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-4P-201ENST00000384205 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-5P-201ENST00000384238 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-3P-201ENST00000384314 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-16P-201ENST00000384385 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-15P-201ENST00000384534 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-2-201ENST00000384627 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-29P-201ENST00000384637 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-9-201ENST00000384776 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-33P-201ENST00000384793 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.594-201ENST00000410373 140 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNA5SP229-201ENST00000410809 99 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 PGBD4P6-201ENST00000421501 610 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 SNRPEP4-201ENST00000435815 279 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RPL21P2-201ENST00000440049 481 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU7-187P-201ENST00000458985 68 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RN7SKP272-201ENST00000516988 232 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-1213P-201ENST00000517075 94 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 AC123912.5-201ENST00000605470 343 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-6P-201ENST00000606623 107 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 AC009229.3-201ENST00000608056 282 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 AL591516.1-201ENST00000611326 274 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 AC068831.7-201ENST00000616954 363 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 AC090617.7-201ENST00000623952 126 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 Z69720.2-201ENST00000624755 279 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 U6.99-201ENST00000637524 83 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 CUL1P1-201ENST00000509510 2425 ntBASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.36□□□□□ -1.87
SSX2IPQ9Y2D8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 SNORA51.4-201ENST00000364993 124 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.422-201ENST00000384054 114 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 RPL21P3-201ENST00000395517 478 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 RN7SKP220-201ENST00000410611 288 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 Z82205.1-201ENST00000428456 297 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 MTND4P19-201ENST00000446659 478 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 PCMTD1P1-201ENST00000455560 355 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-1037P-201ENST00000459571 107 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 AC146507.2-201ENST00000460608 476 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.670-201ENST00000516255 105 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-703P-201ENST00000516946 107 ntBASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SSX2IPQ9Y2D8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms