Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 HMGB1P30-201ENST00000492455 606 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 CYCSP26-201ENST00000534107 320 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AC006362.1-201ENST00000567392 174 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 MIR5692A1-201ENST00000580523 69 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 PIGPP4-201ENST00000584447 307 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AC245008.1-201ENST00000608123 476 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AC069294.1-201ENST00000608397 350 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AP001596.2-201ENST00000608410 312 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AL161423.1-201ENST00000613700 262 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-1287P-201ENST00000362914 107 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-487P-201ENST00000365430 104 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-116P-201ENST00000384042 109 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-843P-201ENST00000384454 104 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-1060P-201ENST00000384664 107 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RNU4-46P-201ENST00000410818 138 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AL356379.1-201ENST00000414105 126 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC097463.2-201ENST00000421074 142 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RPS3AP44-201ENST00000425466 790 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC027124.2-201ENST00000428249 105 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AL669831.1-202ENST00000428504 417 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 GTF2IP13-201ENST00000438487 386 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RPL32P28-201ENST00000443577 397 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 TPT1P7-201ENST00000458300 517 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RPS29P15-201ENST00000458329 171 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 GMFBP1-201ENST00000467831 427 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RPL36AP48-201ENST00000485521 314 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RPL22P13-201ENST00000493291 347 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC008526.1-201ENST00000509149 338 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC104136.1-201ENST00000512969 394 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 MIR892C-201ENST00000516410 77 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 Y_RNA.687-201ENST00000516558 91 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RNA5SP503-201ENST00000517047 117 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 CR383656.8-201ENST00000549046 145 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 SUB1P2-201ENST00000556401 297 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 MIR4703-201ENST00000577728 79 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 AC025449.1-201ENST00000603896 529 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 RN7SKP299-201ENST00000606679 301 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 HAUS6P2-201ENST00000433254 2404 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 Z75746.1-201ENST00000440243 2080 ntBASIC1.81□□□□□ -2.12
TRAPPC4Q9Y296 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 RNU1-72P-201ENST00000362976 153 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-1120P-201ENST00000362988 108 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 Y_RNA.359-201ENST00000365498 102 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-45P-201ENST00000384471 107 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 MIR17-201ENST00000385012 84 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 DEFB108C-201ENST00000400154 252 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 MTATP6P18-201ENST00000417994 673 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC003685.2-201ENST00000422795 395 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 USP9YP8-201ENST00000441913 500 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 MTND1P18-201ENST00000448191 573 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AL356010.1-201ENST00000456364 102 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 snoU109.2-201ENST00000459316 135 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC117503.1-201ENST00000472241 394 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 MTND3P25-201ENST00000509243 135 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC091133.4-201ENST00000511142 308 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 RN7SKP298-201ENST00000515950 94 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 RNU1-41P-201ENST00000516161 162 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 RNU1-48P-201ENST00000516400 162 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 RNU2-44P-201ENST00000516795 194 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC136619.2-201ENST00000563361 631 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC008945.2-201ENST00000606056 604 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 AC005609.4-201ENST00000625071 447 ntBASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAPPC4Q9Y296 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AC138393.1-203ENST00000327086 343 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 OR4G2P-201ENST00000328113 903 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-715P-201ENST00000365204 103 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms