Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RNU6-207P-201ENST00000384137 107 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 SNORD65.1-201ENST00000390889 71 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AL353621.1-201ENST00000418219 243 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 CST2P1-201ENST00000425770 87 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 RPL36AP53-201ENST00000432891 316 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 RNU6-572P-201ENST00000516724 80 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 RNU6-586P-201ENST00000517265 104 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC034114.1-201ENST00000520293 285 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC004817.2-201ENST00000561794 651 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AP001542.1-201ENST00000591314 200 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 VN1R83P-201ENST00000595685 445 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AL132822.1-201ENST00000617063 513 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 MIR6134-201ENST00000617606 109 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC078880.5-201ENST00000617845 421 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC017037.3-201ENST00000625016 472 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 RNU6-611P-201ENST00000384276 104 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 BTF3L4P3-201ENST00000418879 476 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 COX7BP2-201ENST00000437976 242 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 MTCYBP42-201ENST00000444653 1130 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 ACA59.2-201ENST00000517061 156 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC022616.8-201ENST00000533569 253 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC093012.1-202ENST00000549403 582 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 CYP2C61P-201ENST00000604072 290 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC098614.4-201ENST00000607601 462 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 AC008993.2-201ENST00000631744 806 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 Z99571.1-201ENST00000636677 394 ntBASIC0.75□□□□□ -2.29
PHRF1Q9P1Y6 RNU6-1164P-201ENST00000364428 107 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 FTH1P15-201ENST00000406984 280 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 MIR1262-201ENST00000408276 93 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 OR6C5P-201ENST00000452388 923 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 BTF3P15-201ENST00000455606 336 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 HMGB1P28-201ENST00000507778 552 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 PTP4A1P4-201ENST00000512479 322 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 SNORA31.3-201ENST00000516029 96 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 CYCSP27-201ENST00000527643 293 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 AC174048.1-201ENST00000603389 144 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 NDUFA8P1-201ENST00000605525 367 ntBASIC0.74□□□□□ -2.29
PHRF1Q9P1Y6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 Y_RNA.412-201ENST00000384001 104 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AC119751.3-201ENST00000399720 670 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 MTND3P20-201ENST00000407663 186 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 MTCO2P20-201ENST00000437339 673 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 MTCO3P43-201ENST00000440974 771 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 PRELID3BP1-201ENST00000457142 540 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 RPL39P36-201ENST00000490784 156 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AC023194.1-201ENST00000493084 308 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AC024589.1-201ENST00000512207 263 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 OR5B19P-201ENST00000531766 928 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AL161798.1-201ENST00000604630 131 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AC107952.2-201ENST00000606048 486 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AL355802.3-201ENST00000607571 545 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 PCMTD1P7-201ENST00000634506 357 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 U6.99-201ENST00000637524 83 ntBASIC0.73□□□□□ -2.29
PHRF1Q9P1Y6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 Y_RNA.67-201ENST00000362870 100 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 RNU6-188P-201ENST00000364207 107 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 Y_RNA.234-201ENST00000364409 97 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 SNORA25.8-201ENST00000364831 128 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 RNU6-898P-201ENST00000365627 104 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 SNORA40C-201ENST00000391285 128 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 AL079342.2-201ENST00000403367 482 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 MRPS36P1-201ENST00000421291 307 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms