Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 MIR218-2-201ENST00000385006 110 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AC245291.1-201ENST00000419501 328 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AC096644.2-201ENST00000429278 159 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 RPL23AP50-201ENST00000434149 455 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AL731563.1-201ENST00000442202 214 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AL031274.1-201ENST00000450334 232 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AC010099.1-201ENST00000455434 375 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 RNU6-572P-201ENST00000516724 80 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 IGKV2-26-201ENST00000518305 343 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 MIR5701-3-201ENST00000578890 82 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 MIR5701-1-201ENST00000585138 82 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AC006006.1-201ENST00000603082 144 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AL645944.1-201ENST00000603857 493 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 PRR13P7-201ENST00000605538 430 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AC004852.3-201ENST00000614131 326 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AL161629.2-201ENST00000615347 275 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 MIR5701-2-201ENST00000615634 82 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 AC073308.1-201ENST00000623696 305 ntBASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SH3BP4Q9P0V3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 RPL9P7-201ENST00000330965 580 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 Y_RNA.149-201ENST00000363558 117 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 RNU6-450P-201ENST00000364654 107 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 RNU4-42P-201ENST00000364738 142 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 Z98749.2-208ENST00000381646 500 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 Y_RNA.533-201ENST00000384596 114 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 MIR325-201ENST00000385260 98 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 RNA5SP252-201ENST00000391131 119 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AL591034.2-201ENST00000402839 359 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 RN7SKP111-201ENST00000410349 271 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 NUP35P1-201ENST00000422734 947 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC098614.2-201ENST00000426040 255 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 SNRPEP9-201ENST00000436794 238 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AL513043.1-201ENST00000439124 535 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 RPL9P9-202ENST00000466501 579 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC110794.1-201ENST00000505816 425 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 RNU6-703P-201ENST00000516946 107 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC023632.4-201ENST00000517783 191 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC103996.1-201ENST00000555468 102 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 MIR5696-201ENST00000578474 85 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC005046.1-201ENST00000608515 625 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC107294.3-201ENST00000609211 526 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 uc_338.1-201ENST00000612113 180 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 U2.21-201ENST00000637295 81 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 GABRG2-229ENST00000641017 3628 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC091564.4-201ENST00000533934 2194 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AC008669.1-201ENST00000565823 2178 ntBASIC3.17□□□□□ -1.9
SH3BP4Q9P0V3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 RNU6-428P-201ENST00000362942 107 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 RNY1P16-201ENST00000363063 111 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 RNA5SP139-201ENST00000364340 117 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 Y_RNA.574-201ENST00000384766 95 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 RNU6-1156P-201ENST00000410365 100 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 RNA5SP44-201ENST00000410446 133 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 RNU2-68P-201ENST00000410878 191 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 CST9LP2-201ENST00000437612 320 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AL078601.1-201ENST00000444542 271 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AL133547.1-201ENST00000448546 220 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 RBMY2UP-201ENST00000453474 324 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 RPS29P27-201ENST00000463711 170 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AC034236.1-201ENST00000469891 373 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 ACA59.1-201ENST00000515966 143 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 CYCSP39-201ENST00000565821 309 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AC008121.1-201ENST00000603244 268 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 7SK.7-201ENST00000603504 247 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 U4.1-201ENST00000620349 87 ntBASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AC099506.2-201ENST00000623074 221 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms