Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC016831.2-201ENST00000417179 352 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 AC009518.2-201ENST00000418056 731 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.99□□□□□ -2.25
CISHQ9NSE2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.99□□□□□ -2.25
CISHQ9NSE2 AL591212.2-201ENST00000433923 257 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.99□□□□□ -2.25
CISHQ9NSE2 RPS27P1-201ENST00000450552 247 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 RPS26P55-201ENST00000471178 356 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.99□□□□□ -2.25
CISHQ9NSE2 RNU6-914P-201ENST00000516749 109 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 RNU6-677P-201ENST00000516914 101 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.99□□□□□ -2.25
CISHQ9NSE2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.99□□□□□ -2.25
CISHQ9NSE2 AC174048.1-201ENST00000603389 144 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CISHQ9NSE2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
CISHQ9NSE2 MIR302D-201ENST00000362275 68 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 RNU6-942P-201ENST00000363002 107 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 SNORA4.3-201ENST00000365564 137 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 RNA5SP390-201ENST00000410191 113 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.98□□□□□ -2.25
CISHQ9NSE2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.98□□□□□ -2.25
CISHQ9NSE2 RPS27P16-201ENST00000425758 201 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.98□□□□□ -2.25
CISHQ9NSE2 CBX3P6-201ENST00000430257 527 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 AL022238.1-201ENST00000442557 355 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 AC087477.1-201ENST00000465747 340 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 AC093259.1-201ENST00000509755 300 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 RRN3P3-201ENST00000549207 578 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.98□□□□□ -2.25
CISHQ9NSE2 SUB1P4-201ENST00000566062 339 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 AC092325.1-201ENST00000566449 554 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 AC012414.6-201ENST00000568241 401 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 SNORA77B-201ENST00000578179 125 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 AC022893.3-201ENST00000607665 437 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.98□□□□□ -2.25
CISHQ9NSE2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.98□□□□□ -2.25
CISHQ9NSE2 AL121890.5-201ENST00000620848 304 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 FRG1KP-201ENST00000623592 341 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 AC008993.2-201ENST00000631744 806 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 MIR6767-201ENST00000637302 66 ntBASIC0.98□□□□□ -2.25
CISHQ9NSE2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CISHQ9NSE2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
CISHQ9NSE2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CISHQ9NSE2 MIR222-201ENST00000384992 110 ntBASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC119751.3-201ENST00000399720 670 ntBASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 AL365338.1-201ENST00000422282 858 ntBASIC0.97□□□□□ -2.25
CISHQ9NSE2 ISCA1P6-201ENST00000427740 390 ntBASIC0.97□□□□□ -2.25
CISHQ9NSE2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 MTND1P18-201ENST00000448191 573 ntBASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 RPL30P7-201ENST00000479312 323 ntBASIC0.97□□□□□ -2.25
CISHQ9NSE2 SUMO2P5-201ENST00000506790 245 ntBASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 RN7SKP265-201ENST00000516448 223 ntBASIC0.97□□□□□ -2.25
CISHQ9NSE2 SNORA31.16-201ENST00000516773 139 ntBASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.97□□□□□ -2.25
CISHQ9NSE2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.96□□□□□ -2.26
CISHQ9NSE2 MTND5P35-201ENST00000557537 1720 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CISHQ9NSE2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CISHQ9NSE2 Y_RNA.40-201ENST00000362645 93 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 FCF1P10-201ENST00000407590 479 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.96□□□□□ -2.26
CISHQ9NSE2 RPS25P9-201ENST00000435591 252 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AL135790.2-201ENST00000437701 267 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 CALM1P1-201ENST00000442082 433 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC007327.1-201ENST00000447461 264 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AL583843.1-201ENST00000456070 346 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 DUXAP8-207ENST00000456786 622 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 RPL30P6-201ENST00000475925 342 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AP001025.1-201ENST00000486139 332 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC034244.1-201ENST00000507687 207 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 RNU6-965P-201ENST00000516721 96 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.96□□□□□ -2.26
CISHQ9NSE2 AP003122.4-201ENST00000530980 758 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC137800.2-201ENST00000574375 120 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 MTCYBP33-201ENST00000575007 1130 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 MIR3169-201ENST00000578032 83 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC005786.1-201ENST00000588553 154 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC131235.4-201ENST00000609288 620 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 RNU6-1192P-201ENST00000612197 107 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 RNU6-489P-201ENST00000618289 107 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 AC126544.2-201ENST00000625174 749 ntBASIC0.96□□□□□ -2.26
CISHQ9NSE2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CISHQ9NSE2 RNU6-414P-201ENST00000363705 104 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms