Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.94□□□□□ -2.1
POLE3Q9NRF9 AC079781.2-201ENST00000446424 169 ntBASIC1.94□□□□□ -2.1
POLE3Q9NRF9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
POLE3Q9NRF9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.94□□□□□ -2.1
POLE3Q9NRF9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.94□□□□□ -2.1
POLE3Q9NRF9 RN7SKP287-201ENST00000516546 266 ntBASIC1.94□□□□□ -2.1
POLE3Q9NRF9 AP001893.2-201ENST00000526949 202 ntBASIC1.94□□□□□ -2.1
POLE3Q9NRF9 AC018630.3-201ENST00000542637 96 ntBASIC1.94□□□□□ -2.1
POLE3Q9NRF9 OR11H5P-201ENST00000554039 926 ntBASIC1.94□□□□□ -2.1
POLE3Q9NRF9 MIR1273D-201ENST00000577266 86 ntBASIC1.94□□□□□ -2.1
POLE3Q9NRF9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.94□□□□□ -2.1
POLE3Q9NRF9 AL022345.1-201ENST00000607292 135 ntBASIC1.94□□□□□ -2.1
POLE3Q9NRF9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.94□□□□□ -2.1
POLE3Q9NRF9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
POLE3Q9NRF9 SNORA62.1-201ENST00000364287 154 ntBASIC1.93□□□□□ -2.1
POLE3Q9NRF9 MIR597-201ENST00000384968 97 ntBASIC1.93□□□□□ -2.1
POLE3Q9NRF9 RNU2-3P-201ENST00000410144 191 ntBASIC1.93□□□□□ -2.1
POLE3Q9NRF9 RN7SKP284-201ENST00000411002 343 ntBASIC1.93□□□□□ -2.1
POLE3Q9NRF9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.93□□□□□ -2.1
POLE3Q9NRF9 AC007969.2-201ENST00000441891 191 ntBASIC1.93□□□□□ -2.1
POLE3Q9NRF9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.93□□□□□ -2.1
POLE3Q9NRF9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.93□□□□□ -2.1
POLE3Q9NRF9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.93□□□□□ -2.1
POLE3Q9NRF9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.93□□□□□ -2.1
POLE3Q9NRF9 MTND1P22-201ENST00000510572 951 ntBASIC1.93□□□□□ -2.1
POLE3Q9NRF9 AC104136.1-201ENST00000512969 394 ntBASIC1.93□□□□□ -2.1
POLE3Q9NRF9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.93□□□□□ -2.1
POLE3Q9NRF9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.93□□□□□ -2.1
POLE3Q9NRF9 AC009314.1-201ENST00000603871 304 ntBASIC1.93□□□□□ -2.1
POLE3Q9NRF9 IGHVIII-44-202ENST00000636235 289 ntBASIC1.93□□□□□ -2.1
POLE3Q9NRF9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
POLE3Q9NRF9 ZNF355P-201ENST00000427301 3216 ntBASIC1.93□□□□□ -2.1
POLE3Q9NRF9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
POLE3Q9NRF9 SNORA40.3-201ENST00000390964 122 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 RNU6-550P-201ENST00000391057 101 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 POLHP1-201ENST00000411806 470 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.92□□□□□ -2.1
POLE3Q9NRF9 CYCSP33-201ENST00000414485 327 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.92□□□□□ -2.1
POLE3Q9NRF9 CBX3P6-201ENST00000430257 527 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 GPR143P-201ENST00000434155 205 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 IFNA20P-201ENST00000436840 528 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.92□□□□□ -2.1
POLE3Q9NRF9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.92□□□□□ -2.1
POLE3Q9NRF9 AL021397.1-201ENST00000451806 248 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 MTCYBP1-201ENST00000454315 1119 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.92□□□□□ -2.1
POLE3Q9NRF9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.92□□□□□ -2.1
POLE3Q9NRF9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
POLE3Q9NRF9 RNU6-1178P-201ENST00000516674 107 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 AC137800.2-201ENST00000574375 120 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 CYP2C61P-201ENST00000604072 290 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 MIR98-201ENST00000606724 119 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 U1.36-201ENST00000620684 176 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 AC011155.2-201ENST00000623202 216 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.92□□□□□ -2.1
POLE3Q9NRF9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
POLE3Q9NRF9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
POLE3Q9NRF9 RNU1-58P-201ENST00000362413 163 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 RNU6-1164P-201ENST00000364428 107 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 XGY1-201ENST00000381172 446 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 RNU6-1222P-201ENST00000384615 107 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 HMGN1P14-201ENST00000412459 517 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 MTND2P4-201ENST00000445034 1004 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 AL033528.1-201ENST00000453780 140 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 RPL21P99-201ENST00000480369 423 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.91□□□□□ -2.1
POLE3Q9NRF9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.91□□□□□ -2.1
POLE3Q9NRF9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.91□□□□□ -2.1
POLE3Q9NRF9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.91□□□□□ -2.1
POLE3Q9NRF9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.91□□□□□ -2.1
POLE3Q9NRF9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.91□□□□□ -2.1
POLE3Q9NRF9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.91□□□□□ -2.1
POLE3Q9NRF9 SEPT7P9-203ENST00000604116 343 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 YWHAEP7-203ENST00000622054 312 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 DUXAP9-208ENST00000622815 614 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 AL603839.4-201ENST00000624658 1005 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 AC007494.3-201ENST00000624660 743 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 Z69720.2-201ENST00000624755 279 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 U4.7-201ENST00000638126 106 ntBASIC1.91□□□□□ -2.1
POLE3Q9NRF9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
POLE3Q9NRF9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
POLE3Q9NRF9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
POLE3Q9NRF9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.9□□□□□ -2.11
POLE3Q9NRF9 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNU6-37P-201ENST00000362692 107 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNU6-11P-201ENST00000364234 107 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 Y_RNA.324-201ENST00000365165 102 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNU6-25P-201ENST00000383873 107 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNU6-1-201ENST00000383898 107 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNU6-48P-201ENST00000384161 107 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNU6-36P-201ENST00000384172 107 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNU6-4P-201ENST00000384205 107 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNU6-5P-201ENST00000384238 107 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNU6-3P-201ENST00000384314 107 ntBASIC1.9□□□□□ -2.11
POLE3Q9NRF9 RNU6-16P-201ENST00000384385 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms