Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RNU6-3P-201ENST00000384314 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-434P-201ENST00000384376 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-16P-201ENST00000384385 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-15P-201ENST00000384534 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-2-201ENST00000384627 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-29P-201ENST00000384637 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-9-201ENST00000384776 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-33P-201ENST00000384793 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 CALM2P3-201ENST00000400429 449 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RAP1BP3-201ENST00000407180 549 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 U6atac.2-201ENST00000408644 118 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 VN1R108P-201ENST00000431580 830 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RPL7P54-201ENST00000438336 674 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU7-180P-201ENST00000459240 63 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 DYNLL1P5-201ENST00000467158 270 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 LRRC34P2-201ENST00000514850 553 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 SNORA40.12-201ENST00000516329 111 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNA5SP281-201ENST00000516504 135 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 SNORA31.23-201ENST00000517219 133 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 CR383656.8-201ENST00000549046 145 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AC245505.1-201ENST00000556398 224 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AC123912.5-201ENST00000605470 343 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AL121917.1-203ENST00000605534 577 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-6P-201ENST00000606623 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 MIR6895-201ENST00000613497 78 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AC024581.2-201ENST00000619986 252 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AC244517.12-201ENST00000623581 663 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AC097372.5-201ENST00000623665 376 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 AC124864.2-201ENST00000624736 186 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 RNA5SP289-201ENST00000362332 137 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 RNU1-72P-201ENST00000362976 153 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 Y_RNA.255-201ENST00000364581 97 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 RNU5E-7P-201ENST00000365290 117 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 MTCO3P40-201ENST00000392516 676 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 MTCO3P41-201ENST00000414801 328 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 CYCSP48-201ENST00000417124 323 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AL365400.1-201ENST00000431854 640 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AC016691.1-201ENST00000441321 413 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 MTCO2P7-201ENST00000446518 666 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 EEF1B2P7-201ENST00000451177 676 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 SRRM1P2-201ENST00000464531 1192 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AP001025.1-201ENST00000486139 332 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 RNU1-104P-201ENST00000517280 175 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AC104383.1-201ENST00000530297 370 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 SNRPGP18-201ENST00000553000 214 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AP001330.5-201ENST00000607176 411 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-91P-201ENST00000607774 107 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AC017083.3-201ENST00000609955 700 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 Z69720.2-201ENST00000624755 279 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AL160394.1-201ENST00000624765 724 ntBASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
EXOSC3Q9NQT5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.03□□□□□ -2.09
EXOSC3Q9NQT5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 SNORD114-19-201ENST00000363072 75 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 MIR221-201ENST00000385135 110 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 SNORD37.1-201ENST00000390968 65 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 RNU6-780P-201ENST00000391030 104 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AL606923.1-201ENST00000406616 190 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AC074117.2-201ENST00000417130 397 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 EIF4EP4-201ENST00000424916 578 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AC080013.2-201ENST00000460866 323 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AC018437.1-201ENST00000492214 406 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 RPL23AP49-201ENST00000492925 468 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms