Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.26□□□□□ -2.05
HPS4Q9NQG7 MIR4775-201ENST00000581168 75 ntBASIC2.26□□□□□ -2.05
HPS4Q9NQG7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.26□□□□□ -2.05
HPS4Q9NQG7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.26□□□□□ -2.05
HPS4Q9NQG7 MIR219B-201ENST00000637023 88 ntBASIC2.26□□□□□ -2.05
HPS4Q9NQG7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
HPS4Q9NQG7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.26□□□□□ -2.05
HPS4Q9NQG7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 RNU6-181P-201ENST00000363225 107 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 RNU6-456P-201ENST00000384493 107 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 PGBD4P6-201ENST00000421501 610 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 EIF4EP4-201ENST00000424916 578 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 CALM1P1-201ENST00000442082 433 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 MTCO2P7-201ENST00000446518 666 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 MED28P2-201ENST00000475771 317 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 RNU6-445P-201ENST00000516949 107 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AP004607.1-201ENST00000524456 203 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AL138976.2-201ENST00000563989 694 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AGGF1P4-201ENST00000568249 801 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AC087683.1-201ENST00000591187 441 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AC072046.2-201ENST00000618366 268 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AC099842.1-201ENST00000619919 596 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AL160394.1-201ENST00000624765 724 ntBASIC2.25□□□□□ -2.05
HPS4Q9NQG7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HPS4Q9NQG7 RNU6-1287P-201ENST00000362914 107 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 RNU6-1060P-201ENST00000384664 107 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 MIR17-201ENST00000385012 84 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 RNU6-550P-201ENST00000391057 101 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 AL663109.1-201ENST00000411498 844 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 MTND1P23-201ENST00000416931 372 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.24□□□□□ -2.05
HPS4Q9NQG7 PSPHP1-201ENST00000450062 261 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.24□□□□□ -2.05
HPS4Q9NQG7 AL162395.1-201ENST00000457882 422 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 RNU7-182P-201ENST00000459009 62 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 AC090515.1-201ENST00000465295 476 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 HMGB1P30-201ENST00000492455 606 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 AC008526.1-201ENST00000509149 338 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.24□□□□□ -2.05
HPS4Q9NQG7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 RNA5SP200-201ENST00000516360 103 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 Y_RNA.687-201ENST00000516558 91 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 CR383656.8-201ENST00000549046 145 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 AC109347.2-201ENST00000610220 349 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 AC009318.2-201ENST00000610917 651 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 Z99129.1-201ENST00000612510 255 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 AC091834.1-201ENST00000614543 472 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 AC009831.4-201ENST00000620744 325 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 SEPT14P19-203ENST00000633205 211 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
HPS4Q9NQG7 RBBP8P1-201ENST00000449447 1844 ntBASIC2.24□□□□□ -2.05
HPS4Q9NQG7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 RNU1-72P-201ENST00000362976 153 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 RNU6-843P-201ENST00000384454 104 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 RNU2-66P-201ENST00000410650 161 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AL031659.1-201ENST00000447075 539 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 MTND3P25-201ENST00000509243 135 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 RNU6-405P-201ENST00000516637 110 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 CBX3P7-201ENST00000532876 502 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AL133241.1-201ENST00000556832 487 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC073539.2-201ENST00000597113 165 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 BNIP3P30-201ENST00000601184 574 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC096772.1-201ENST00000609146 564 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC009233.1-201ENST00000616477 371 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 MIR3529-201ENST00000637713 78 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 KPNA2P1-201ENST00000458289 1591 ntBASIC2.23□□□□□ -2.05
HPS4Q9NQG7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HPS4Q9NQG7 AC008555.8-201ENST00000623602 2168 ntBASIC2.22□□□□□ -2.05
HPS4Q9NQG7 AL356292.1-201ENST00000283110 373 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms