Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 AP001324.2-201ENST00000461163 319 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 RN7SL738P-201ENST00000470264 297 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.01□□□□□ -1.77
SSU72Q9NP77 AL078605.1-201ENST00000603529 500 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 AL590392.1-201ENST00000604960 446 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 AC004832.4-201ENST00000608952 331 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 SDR42E1P1-201ENST00000611327 477 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 AC104465.1-201ENST00000611365 139 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 MIR7151-201ENST00000617477 60 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SSU72Q9NP77 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.01□□□□□ -1.77
SSU72Q9NP77 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SSU72Q9NP77 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SSU72Q9NP77 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.01□□□□□ -1.77
SSU72Q9NP77 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SSU72Q9NP77 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SSU72Q9NP77 AL353746.1-201ENST00000566293 6881 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSU72Q9NP77 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4□□□□□ -1.77
SSU72Q9NP77 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4□□□□□ -1.77
SSU72Q9NP77 SNORD35B-201ENST00000363660 87 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 RNU6-884P-201ENST00000363889 107 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 Y_RNA.217-201ENST00000364214 105 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 Y_RNA.230-201ENST00000364348 109 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 RNU6-142P-201ENST00000384019 107 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 MIR129-1-201ENST00000384972 72 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4□□□□□ -1.77
SSU72Q9NP77 RPL21P66-201ENST00000426566 466 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4□□□□□ -1.77
SSU72Q9NP77 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4□□□□□ -1.77
SSU72Q9NP77 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4□□□□□ -1.77
SSU72Q9NP77 UQCRBP2-201ENST00000447827 297 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 snoU13.6-201ENST00000458785 104 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 Y_RNA.641-201ENST00000459414 105 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 AC011276.1-201ENST00000469688 323 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 AC078918.1-201ENST00000498515 228 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 RNU6-1219P-201ENST00000516143 112 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4□□□□□ -1.77
SSU72Q9NP77 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4□□□□□ -1.77
SSU72Q9NP77 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4□□□□□ -1.77
SSU72Q9NP77 AL049539.1-201ENST00000611964 459 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 MIR6780A-201ENST00000615089 68 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 AL591424.2-201ENST00000617023 128 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 AL365265.1-201ENST00000621045 234 ntBASIC4□□□□□ -1.77
SSU72Q9NP77 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4□□□□□ -1.77
SSU72Q9NP77 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
SSU72Q9NP77 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4□□□□□ -1.77
SSU72Q9NP77 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4□□□□□ -1.77
SSU72Q9NP77 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4□□□□□ -1.77
SSU72Q9NP77 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSU72Q9NP77 BX322639.1-202ENST00000423987 2213 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSU72Q9NP77 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSU72Q9NP77 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSU72Q9NP77 RNU6-81P-201ENST00000365608 104 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 RNU6-1279P-201ENST00000383917 103 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 Y_RNA.398-201ENST00000383952 99 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 MIR544A-201ENST00000384855 91 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 RNU6-1245P-201ENST00000411130 106 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 RPL37P18-201ENST00000411602 243 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 RPL23AP26-201ENST00000412728 464 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.99□□□□□ -1.77
SSU72Q9NP77 AL358075.3-201ENST00000426289 226 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 AC010095.1-201ENST00000443543 144 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 AC125238.1-201ENST00000448842 249 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.99□□□□□ -1.77
SSU72Q9NP77 AC099522.1-202ENST00000514718 367 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.99□□□□□ -1.77
SSU72Q9NP77 HSPE1P4-201ENST00000550617 308 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.99□□□□□ -1.77
SSU72Q9NP77 MIR4270-201ENST00000581799 70 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 AC019159.1-201ENST00000605094 187 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 BMS1P21-201ENST00000634565 365 ntBASIC3.99□□□□□ -1.77
SSU72Q9NP77 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSU72Q9NP77 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSU72Q9NP77 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.99□□□□□ -1.77
SSU72Q9NP77 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSU72Q9NP77 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.99□□□□□ -1.77
SSU72Q9NP77 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSU72Q9NP77 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSU72Q9NP77 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSU72Q9NP77 RNU6-1141P-201ENST00000364520 107 ntBASIC3.98□□□□□ -1.77
SSU72Q9NP77 Y_RNA.331-201ENST00000365267 102 ntBASIC3.98□□□□□ -1.77
SSU72Q9NP77 Y_RNA.435-201ENST00000384095 112 ntBASIC3.98□□□□□ -1.77
SSU72Q9NP77 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.98□□□□□ -1.77
SSU72Q9NP77 SETP5-201ENST00000437270 562 ntBASIC3.98□□□□□ -1.77
SSU72Q9NP77 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.98□□□□□ -1.77
SSU72Q9NP77 RN7SL629P-201ENST00000489622 285 ntBASIC3.98□□□□□ -1.77
SSU72Q9NP77 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.98□□□□□ -1.77
SSU72Q9NP77 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.98□□□□□ -1.77
SSU72Q9NP77 AC025627.2-201ENST00000576220 160 ntBASIC3.98□□□□□ -1.77
SSU72Q9NP77 AC022441.3-201ENST00000605737 136 ntBASIC3.98□□□□□ -1.77
SSU72Q9NP77 AC005828.6-201ENST00000606610 232 ntBASIC3.98□□□□□ -1.77
SSU72Q9NP77 AC073349.3-201ENST00000617616 186 ntBASIC3.98□□□□□ -1.77
SSU72Q9NP77 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSU72Q9NP77 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSU72Q9NP77 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSU72Q9NP77 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SSU72Q9NP77 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms