Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLR1BQ9H9Y6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.77□□□□□ -1.97
POLR1BQ9H9Y6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
POLR1BQ9H9Y6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLR1BQ9H9Y6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-37P-201ENST00000362692 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 Y_RNA.100-201ENST00000363141 102 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-11P-201ENST00000364234 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-25P-201ENST00000383873 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-1-201ENST00000383898 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-48P-201ENST00000384161 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-36P-201ENST00000384172 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-4P-201ENST00000384205 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-5P-201ENST00000384238 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-3P-201ENST00000384314 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-16P-201ENST00000384385 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 SNORD116-20-201ENST00000384529 92 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-15P-201ENST00000384534 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-2-201ENST00000384627 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-29P-201ENST00000384637 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-9-201ENST00000384776 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-33P-201ENST00000384793 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 MIR627-201ENST00000384979 97 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNA5SP390-201ENST00000410191 113 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 SNORD56-201ENST00000413522 71 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AP001324.2-201ENST00000461163 319 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 HMGN2P26-201ENST00000463169 339 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC133134.1-201ENST00000466800 359 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC008571.1-201ENST00000467232 300 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RPL23AP45-201ENST00000476406 468 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RPL7P43-201ENST00000478876 753 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 TRBV12-1-201ENST00000479785 344 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNA5SP112-201ENST00000515937 99 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-1069P-201ENST00000516612 133 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC087854.1-201ENST00000519706 414 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 COX6CP5-201ENST00000527162 228 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC079600.2-201ENST00000550076 130 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC091544.4-201ENST00000555268 342 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 MIR4765-201ENST00000585007 77 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-6P-201ENST00000606623 107 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC002553.4-201ENST00000616896 331 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC244517.12-201ENST00000623581 663 ntBASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.76□□□□□ -1.97
POLR1BQ9H9Y6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-486P-201ENST00000363116 107 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 Y_RNA.157-201ENST00000363638 102 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 Y_RNA.167-201ENST00000363735 109 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 MIR181A2-201ENST00000384863 110 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 AL360182.1-201ENST00000397433 468 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 AC074117.2-201ENST00000417130 397 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 AL121890.1-201ENST00000435457 205 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 FABP5P14-201ENST00000437273 393 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 AC013470.1-201ENST00000453438 462 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-377P-201ENST00000515965 102 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-1038P-201ENST00000516516 104 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-826P-201ENST00000516827 104 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 AC079598.5-201ENST00000547460 117 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 AC103810.1-201ENST00000579873 453 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 VN1R107P-201ENST00000601784 209 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 AC021646.1-201ENST00000605469 484 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 RMST_3.1-201ENST00000611651 109 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 AC007318.2-201ENST00000620999 243 ntBASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
POLR1BQ9H9Y6 MAPK10-266ENST00000641066 6555 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 RNU2-52P-201ENST00000410680 190 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 RNA5SP492-201ENST00000411330 114 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 AC092989.1-201ENST00000481235 277 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 TRBVA-201ENST00000498804 316 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 SNORA19.2-201ENST00000516013 114 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 SNORA31.23-201ENST00000517219 133 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 AC109329.1-201ENST00000518744 317 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 BTF3P12-201ENST00000519620 469 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 CKS1BP7-201ENST00000522230 235 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 AC010186.2-204ENST00000537668 439 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms