Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNA5SP133-201ENST00000363368 119 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 RNU6-865P-201ENST00000364772 107 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 RNA5SP138-201ENST00000365098 114 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 RNA5SP30-201ENST00000365552 115 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 MIR130A-201ENST00000385274 89 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 RNU11-5P-201ENST00000391216 129 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 RPL23AP48-201ENST00000406913 488 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 RNU6-177P-201ENST00000411257 104 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 RNU7-34P-201ENST00000459394 64 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 RPPH1-2P-201ENST00000516688 293 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 MTND5P40-201ENST00000559945 246 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 MRPS21P7-201ENST00000566937 238 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 RNU1-30P-201ENST00000606575 163 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 AC069503.3-201ENST00000618674 145 ntBASIC6.17□□□□□ -1.42
RNF39Q9H2S5 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 RNU6-1019P-201ENST00000364424 107 ntBASIC6.16□□□□□ -1.42
RNF39Q9H2S5 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.16□□□□□ -1.42
RNF39Q9H2S5 SNORA2B-201ENST00000384583 137 ntBASIC6.16□□□□□ -1.42
RNF39Q9H2S5 RNU6-748P-201ENST00000384648 107 ntBASIC6.16□□□□□ -1.42
RNF39Q9H2S5 RNU4-88P-201ENST00000411220 86 ntBASIC6.16□□□□□ -1.42
RNF39Q9H2S5 GOT2P5-201ENST00000433995 546 ntBASIC6.16□□□□□ -1.42
RNF39Q9H2S5 AC011753.3-201ENST00000443436 406 ntBASIC6.16□□□□□ -1.42
RNF39Q9H2S5 IGLV3-24-201ENST00000517477 197 ntBASIC6.16□□□□□ -1.42
RNF39Q9H2S5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 AC092490.3-201ENST00000545370 572 ntBASIC6.16□□□□□ -1.42
RNF39Q9H2S5 AC126615.2-201ENST00000553003 515 ntBASIC6.16□□□□□ -1.42
RNF39Q9H2S5 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC6.16□□□□□ -1.42
RNF39Q9H2S5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RNF39Q9H2S5 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF39Q9H2S5 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RNF39Q9H2S5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC6.15□□□□□ -1.42
RNF39Q9H2S5 RNU6-1079P-201ENST00000362861 110 ntBASIC6.15□□□□□ -1.42
RNF39Q9H2S5 AC114755.2-201ENST00000413520 361 ntBASIC6.15□□□□□ -1.42
RNF39Q9H2S5 AL356535.1-201ENST00000440335 398 ntBASIC6.15□□□□□ -1.42
RNF39Q9H2S5 RPL23AP93-201ENST00000440847 484 ntBASIC6.15□□□□□ -1.42
RNF39Q9H2S5 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
RNF39Q9H2S5 AC009963.2-201ENST00000453431 138 ntBASIC6.15□□□□□ -1.42
RNF39Q9H2S5 AL691482.2-201ENST00000457453 84 ntBASIC6.15□□□□□ -1.42
RNF39Q9H2S5 AC012493.2-201ENST00000595083 291 ntBASIC6.15□□□□□ -1.42
RNF39Q9H2S5 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.15□□□□□ -1.42
RNF39Q9H2S5 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.15□□□□□ -1.43
RNF39Q9H2S5 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
RNF39Q9H2S5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF39Q9H2S5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
RNF39Q9H2S5 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
RNF39Q9H2S5 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF39Q9H2S5 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF39Q9H2S5 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF39Q9H2S5 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF39Q9H2S5 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF39Q9H2S5 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF39Q9H2S5 AC000403.1-201ENST00000613696 3585 ntBASIC6.14□□□□□ -1.43
RNF39Q9H2S5 Y_RNA.241-201ENST00000364470 117 ntBASIC6.14□□□□□ -1.43
RNF39Q9H2S5 RN7SKP276-201ENST00000516242 268 ntBASIC6.14□□□□□ -1.43
RNF39Q9H2S5 RNU6-826P-201ENST00000516827 104 ntBASIC6.14□□□□□ -1.43
RNF39Q9H2S5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.14□□□□□ -1.43
RNF39Q9H2S5 AC024220.1-201ENST00000603675 484 ntBASIC6.14□□□□□ -1.43
RNF39Q9H2S5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC6.14□□□□□ -1.43
RNF39Q9H2S5 AC090607.5-201ENST00000615692 224 ntBASIC6.14□□□□□ -1.43
RNF39Q9H2S5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF39Q9H2S5 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF39Q9H2S5 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RNF39Q9H2S5 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RNF39Q9H2S5 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 Y_RNA.12-201ENST00000362393 112 ntBASIC6.13□□□□□ -1.43
RNF39Q9H2S5 RNU6-1084P-201ENST00000362498 107 ntBASIC6.13□□□□□ -1.43
RNF39Q9H2S5 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 RNA5SP91-201ENST00000390902 119 ntBASIC6.13□□□□□ -1.43
RNF39Q9H2S5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 AL441985.1-201ENST00000457727 251 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms