Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 AL672296.1-201ENST00000427780 2158 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 RNU6-778P-201ENST00000363269 103 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 SNORA71.1-201ENST00000364523 117 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 RNU6-1317P-201ENST00000364582 104 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 RNU6-1032P-201ENST00000384100 107 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 RNY1P14-201ENST00000384426 108 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 RNU6-790P-201ENST00000384479 105 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 SNORD67-201ENST00000390833 111 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AC245291.1-201ENST00000419501 328 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AC013470.1-201ENST00000453438 462 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 RNU6-1037P-201ENST00000459571 107 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 RN7SL330P-201ENST00000469709 307 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AL049873.1-201ENST00000480540 376 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 RPS4XP13-201ENST00000483219 789 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 RNU6-1046P-201ENST00000516538 107 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 Y_RNA.687-201ENST00000516558 91 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 EIF4BP1-201ENST00000554881 351 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 MIR3186-201ENST00000577404 85 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AC005899.2-201ENST00000584353 90 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 BNIP3P16-201ENST00000589779 534 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AC008737.2-201ENST00000599446 118 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AC009314.1-201ENST00000603871 304 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AL137843.1-201ENST00000605078 385 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 MIR3976-201ENST00000606807 139 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AC083806.3-201ENST00000614016 455 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 SCARNA15.3-201ENST00000626315 122 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 SCARNA4.1-201ENST00000628597 123 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 U6.99-201ENST00000637524 83 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 MIR7153-201ENST00000637758 57 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
CIPCQ9C0C6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.17□□□□□ -1.9
CIPCQ9C0C6 AC022336.2-201ENST00000568966 2538 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 Y_RNA.111-201ENST00000363248 100 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 RNU6-72P-201ENST00000384285 79 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AL513475.1-201ENST00000406602 315 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 BX276092.3-201ENST00000424182 230 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC008267.5-201ENST00000424928 265 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 TOMM20P4-201ENST00000427861 435 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AL160004.2-201ENST00000432935 350 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 HMGB1P12-201ENST00000438594 598 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC011816.1-201ENST00000441346 546 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 HIGD1AP2-201ENST00000446367 280 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 snoU109.2-201ENST00000459316 135 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 Y_RNA.661-201ENST00000516003 99 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 RNU6-307P-201ENST00000516743 106 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 RNU6-1183P-201ENST00000517054 60 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC103996.1-201ENST00000555468 102 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AL137790.1-201ENST00000634283 177 ntBASIC3.16□□□□□ -1.9
CIPCQ9C0C6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CIPCQ9C0C6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
CIPCQ9C0C6 AC000403.1-201ENST00000613696 3585 ntBASIC3.15□□□□□ -1.9
CIPCQ9C0C6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 RPL9P7-201ENST00000330965 580 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 MIR22-201ENST00000362190 85 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 SNORD56.3-201ENST00000363507 71 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 U8.8-201ENST00000365399 135 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 AC117470.1-201ENST00000381974 330 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 SNORA44-201ENST00000384584 132 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 EI24P2-201ENST00000397776 1076 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 AL513043.1-201ENST00000439124 535 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 GSTA11P-201ENST00000452866 669 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 MTATP6P7-201ENST00000453315 681 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 RPL9P9-202ENST00000466501 579 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 RPL23AP14-201ENST00000468281 468 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 HMGN2P13-201ENST00000476476 274 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms