Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 BRDTP1-201ENST00000605735 677 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 AC039056.2-201ENST00000622261 511 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 Y_RNA.76-201ENST00000362931 109 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 RPS4XP3-201ENST00000398541 413 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 SNORA11-201ENST00000408789 128 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 RNA5SP44-201ENST00000410446 133 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 GOT2P5-201ENST00000433995 546 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 HMGN2P21-201ENST00000447764 270 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 SNORA84-201ENST00000459229 133 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 AL133162.1-201ENST00000463228 453 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 COX6CP14-201ENST00000469580 174 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 AP000870.1-201ENST00000472927 406 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 RPS26P15-201ENST00000488067 348 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU2-31P-201ENST00000516954 155 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 AC090281.1-201ENST00000523019 276 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 MIR3133-201ENST00000583157 78 ntBASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
ZKSCAN3Q9BRR0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 Z98749.2-208ENST00000381646 500 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 MIR518D-201ENST00000385014 87 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU5A-5P-201ENST00000411054 116 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 RNA5SP39-201ENST00000411245 120 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 AC243964.1-201ENST00000441814 261 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 AC087477.1-201ENST00000465747 340 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 RPL7P49-201ENST00000471402 708 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 AF186996.7-201ENST00000492781 209 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 AC107393.1-201ENST00000512403 346 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-255P-201ENST00000516957 105 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 AC016256.1-201ENST00000547971 354 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 AL356157.2-201ENST00000605122 111 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 CR392039.5-201ENST00000623201 510 ntBASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZKSCAN3Q9BRR0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.4□□□□□ -1.7
ZKSCAN3Q9BRR0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ZKSCAN3Q9BRR0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-658P-201ENST00000384606 106 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 MIR325-201ENST00000385260 98 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 MIR708-201ENST00000390708 88 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 RNA5SP213-201ENST00000391031 106 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 SNORD12B-201ENST00000410433 91 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 AL031659.1-201ENST00000447075 539 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 AK6P2-201ENST00000549020 471 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 AC010620.2-201ENST00000600135 313 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 AL162424.1-201ENST00000602325 221 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU1-30P-201ENST00000606575 163 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 AC024581.2-201ENST00000619986 252 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 AC012442.3-202ENST00000636742 206 ntBASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.4□□□□□ -1.71
ZKSCAN3Q9BRR0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 FTLP6-201ENST00000355274 422 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-942P-201ENST00000363002 107 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-142P-201ENST00000384019 107 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-187P-201ENST00000384139 106 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-541P-201ENST00000384709 110 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-1197P-201ENST00000391183 107 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 HLFP1-201ENST00000402375 499 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6ATAC-201ENST00000408749 126 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 RPL21P66-201ENST00000426566 466 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 AL512844.2-201ENST00000433990 593 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 AC096638.1-201ENST00000444678 216 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 RPL30P5-201ENST00000494923 336 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU1-103P-201ENST00000516502 125 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms