Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.08□□□□□ -1.92
PAAF1Q9BRP4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.08□□□□□ -1.92
PAAF1Q9BRP4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.08□□□□□ -1.92
PAAF1Q9BRP4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.08□□□□□ -1.92
PAAF1Q9BRP4 AC019193.3-201ENST00000609144 554 ntBASIC3.08□□□□□ -1.92
PAAF1Q9BRP4 U4.7-201ENST00000638126 106 ntBASIC3.08□□□□□ -1.92
PAAF1Q9BRP4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PAAF1Q9BRP4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PAAF1Q9BRP4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 RPL9P7-201ENST00000330965 580 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 RNA5SP383-201ENST00000362934 120 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 Y_RNA.339-201ENST00000365325 102 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 RNU6-19P-201ENST00000384718 107 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AL030996.1-201ENST00000411430 235 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AC236972.2-201ENST00000434979 310 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 FABP5P14-201ENST00000437273 393 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AL513043.1-201ENST00000439124 535 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 U8.21-201ENST00000459536 136 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 RPL9P9-202ENST00000466501 579 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AC107626.1-201ENST00000471084 183 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 RN7SL633P-201ENST00000488974 297 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 POLR3GP2-201ENST00000588366 668 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AC009314.1-201ENST00000603871 304 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 AC096644.4-201ENST00000563417 2912 ntBASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.07□□□□□ -1.92
PAAF1Q9BRP4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AC062016.1-201ENST00000355719 319 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 Y_RNA.151-201ENST00000363566 112 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 RNA5SP139-201ENST00000364340 117 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 RNU1-112P-201ENST00000364401 164 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 CD24P4-201ENST00000382840 243 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 Y_RNA.474-201ENST00000384341 102 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 Y_RNA.482-201ENST00000384377 111 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 MIR517A-201ENST00000385001 87 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 RNU6-325P-201ENST00000411132 105 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AC245054.2-201ENST00000415639 319 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AL117339.3-201ENST00000418733 162 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AL139281.1-201ENST00000422120 335 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 PTGES3P4-201ENST00000426243 356 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AC116337.1-201ENST00000509680 687 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 SMURF2P1-201ENST00000514992 481 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 ACA59.2-201ENST00000517061 156 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 TRAV32-201ENST00000553993 340 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AC010889.1-201ENST00000566193 2666 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AC010653.1-201ENST00000571108 881 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AC124303.1-201ENST00000605703 360 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 AL161423.1-201ENST00000613700 262 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 PISRT1.1-201ENST00000616930 107 ntBASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PAAF1Q9BRP4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 Y_RNA.11-201ENST00000362375 109 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 RNU6-942P-201ENST00000363002 107 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 RNU6-1297P-201ENST00000384415 104 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 RNU6-306P-201ENST00000384617 107 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 MIR147B-201ENST00000390185 80 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 RNU6-750P-201ENST00000390946 107 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 EI24P2-201ENST00000397776 1076 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 RNU2-52P-201ENST00000410680 190 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 RNU6-370P-201ENST00000411008 104 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 AC096649.2-201ENST00000416186 393 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 AL109933.2-201ENST00000452651 260 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 SNORD19.2-201ENST00000516978 73 ntBASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.05□□□□□ -1.92
PAAF1Q9BRP4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms