Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CYCSP26-201ENST00000534107 320 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 AC079600.2-201ENST00000550076 130 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.22□□□□□ -2.05
SSX3Q99909 AC027176.1-201ENST00000560204 514 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.22□□□□□ -2.05
SSX3Q99909 MIR5583-1-201ENST00000580941 59 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-6P-201ENST00000606623 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 Z82243.1-201ENST00000609432 473 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 U2.17-201ENST00000611454 95 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 uc_338.34-201ENST00000617467 174 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 AP003400.5-201ENST00000624827 617 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SSX3Q99909 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.21□□□□□ -2.06
SSX3Q99909 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
SSX3Q99909 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SSX3Q99909 AL596028.1-201ENST00000326971 197 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 RNU6-1010P-201ENST00000362757 107 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 RNU6-527P-201ENST00000363425 104 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 RNU6-1085P-201ENST00000363576 107 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 RNU6-1322P-201ENST00000364309 107 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 RNU1-112P-201ENST00000364401 164 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 Y_RNA.399-201ENST00000383955 105 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 Y_RNA.517-201ENST00000384551 106 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 MIR9-1-201ENST00000385198 89 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 SNORD37.1-201ENST00000390968 65 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 MTCO3P40-201ENST00000392516 676 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 RNU2-52P-201ENST00000410680 190 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 MTCO3P41-201ENST00000414801 328 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 DNAJC19P4-201ENST00000440115 345 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AC016691.1-201ENST00000441321 413 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AC009238.1-201ENST00000442165 424 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AC009237.6-201ENST00000446969 424 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 FDX1P2-201ENST00000450769 375 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.21□□□□□ -2.06
SSX3Q99909 CYP2C59P-201ENST00000457790 269 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.21□□□□□ -2.06
SSX3Q99909 RNU7-180P-201ENST00000459240 63 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AP001025.1-201ENST00000486139 332 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.21□□□□□ -2.06
SSX3Q99909 RPS27P27-201ENST00000498779 255 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AP001893.2-201ENST00000526949 202 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 PSMA3P-201ENST00000555485 635 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 MIR3126-201ENST00000577443 74 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.21□□□□□ -2.06
SSX3Q99909 AC090897.2-201ENST00000581715 130 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 MIR3941-201ENST00000582572 103 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AC073410.2-201ENST00000603240 332 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AC002044.1-201ENST00000606707 158 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 MIR6840-201ENST00000611937 71 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 AC068792.1-201ENST00000621354 417 ntBASIC2.21□□□□□ -2.06
SSX3Q99909 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SSX3Q99909 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.21□□□□□ -2.06
SSX3Q99909 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SSX3Q99909 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SSX3Q99909 AC062016.1-201ENST00000355719 319 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 RNU6-859P-201ENST00000362728 107 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 RNA5SP240-201ENST00000365355 128 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 RNU1-57P-201ENST00000384491 166 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 RNA5SP390-201ENST00000410191 113 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 RNA5SP21-201ENST00000410917 96 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.2□□□□□ -2.06
SSX3Q99909 AIMP1P2-201ENST00000425294 312 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 ARL5AP4-201ENST00000430731 512 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 AL591043.1-201ENST00000432461 424 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 AL161788.1-201ENST00000441805 169 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 MTND1P1-201ENST00000445453 368 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.2□□□□□ -2.06
SSX3Q99909 RNU7-167P-201ENST00000459160 62 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 AC003982.1-202ENST00000469928 248 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 AC083798.1-201ENST00000472671 131 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.2□□□□□ -2.06
SSX3Q99909 MTCYBP40-201ENST00000509390 1135 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SSX3Q99909 AC109329.1-201ENST00000518744 317 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.2□□□□□ -2.06
SSX3Q99909 AC104383.1-201ENST00000530297 370 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 AC023050.3-201ENST00000541142 333 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.2□□□□□ -2.06
SSX3Q99909 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.2□□□□□ -2.06
SSX3Q99909 AC245505.1-201ENST00000556398 224 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 MTCO3P23-201ENST00000561363 289 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 AL359880.1-201ENST00000621879 266 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
SSX3Q99909 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.2□□□□□ -2.06
SSX3Q99909 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SSX3Q99909 AL136360.1-201ENST00000503377 1900 ntBASIC2.19□□□□□ -2.06
SSX3Q99909 RNU6-623P-201ENST00000363143 105 ntBASIC2.19□□□□□ -2.06
SSX3Q99909 RNU6-266P-201ENST00000364225 107 ntBASIC2.19□□□□□ -2.06
SSX3Q99909 Y_RNA.318-201ENST00000365131 97 ntBASIC2.19□□□□□ -2.06
SSX3Q99909 RNU6-1032P-201ENST00000384100 107 ntBASIC2.19□□□□□ -2.06
SSX3Q99909 AL360182.1-201ENST00000397433 468 ntBASIC2.19□□□□□ -2.06
SSX3Q99909 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.19□□□□□ -2.06
SSX3Q99909 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.19□□□□□ -2.06
SSX3Q99909 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.19□□□□□ -2.06
SSX3Q99909 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.19□□□□□ -2.06
SSX3Q99909 PSPHP1-201ENST00000450062 261 ntBASIC2.19□□□□□ -2.06
SSX3Q99909 RNU6-261P-201ENST00000459506 102 ntBASIC2.19□□□□□ -2.06
SSX3Q99909 RPL23AP45-201ENST00000476406 468 ntBASIC2.19□□□□□ -2.06
SSX3Q99909 AC107222.1-201ENST00000510899 637 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms