Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.27□□□□□ -2.05
LITAFQ99732 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.27□□□□□ -2.05
LITAFQ99732 AC104581.2-201ENST00000572227 430 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.27□□□□□ -2.05
LITAFQ99732 MIR4506-201ENST00000584693 77 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 VN1R91P-201ENST00000594377 169 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 Z98751.3-201ENST00000604447 521 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 AL356157.2-201ENST00000605122 111 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.27□□□□□ -2.05
LITAFQ99732 U2.1-201ENST00000618978 145 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 AC006111.3-201ENST00000622137 383 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 AC018445.2-201ENST00000622987 260 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.27□□□□□ -2.05
LITAFQ99732 MIR3529-201ENST00000637713 78 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LITAFQ99732 RLIMP1-201ENST00000339626 1680 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LITAFQ99732 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
LITAFQ99732 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LITAFQ99732 AC233981.2-201ENST00000611524 1614 ntBASIC2.27□□□□□ -2.05
LITAFQ99732 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LITAFQ99732 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.27□□□□□ -2.05
LITAFQ99732 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LITAFQ99732 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LITAFQ99732 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LITAFQ99732 MTND5P1-201ENST00000445440 1375 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LITAFQ99732 AL136164.4-201ENST00000625013 2135 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LITAFQ99732 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
LITAFQ99732 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LITAFQ99732 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LITAFQ99732 RNA5SP295-201ENST00000362655 121 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 Y_RNA.47-201ENST00000362697 108 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 Y_RNA.106-201ENST00000363189 100 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 SNORA51.4-201ENST00000364993 124 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 Y_RNA.380-201ENST00000365663 111 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC2.26□□□□□ -2.05
LITAFQ99732 RNU6-213P-201ENST00000384051 104 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 RNU6-968P-201ENST00000384076 107 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 MIR544A-201ENST00000384855 91 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LITAFQ99732 SAR1AP2-201ENST00000392696 594 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 MIR190B-201ENST00000401119 79 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 SNORA3.3-201ENST00000408712 125 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 RN7SKP123-201ENST00000410732 291 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 RPL32P35-201ENST00000415214 394 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 EIF1AXP1-201ENST00000419267 435 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 AL358453.1-201ENST00000422522 250 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 RPL23AP95-201ENST00000426806 265 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 IPO7P1-201ENST00000442031 636 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.26□□□□□ -2.05
LITAFQ99732 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.26□□□□□ -2.05
LITAFQ99732 AC115115.1-201ENST00000449927 248 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 UQCRHP3-201ENST00000451503 251 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.26□□□□□ -2.05
LITAFQ99732 AC093852.1-201ENST00000503587 266 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.26□□□□□ -2.05
LITAFQ99732 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.26□□□□□ -2.05
LITAFQ99732 RNU7-175P-201ENST00000515915 61 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 RNU5F-8P-201ENST00000515941 111 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 AC040926.1-201ENST00000530195 238 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.26□□□□□ -2.05
LITAFQ99732 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.26□□□□□ -2.05
LITAFQ99732 AC120057.2-201ENST00000571520 271 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 MIR4503-201ENST00000582187 83 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 MIR4480-201ENST00000582492 71 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 AC006557.5-201ENST00000603126 811 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 7SK.7-201ENST00000603504 247 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 AL356218.2-201ENST00000605264 187 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 MIR6500-201ENST00000622700 86 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LITAFQ99732 HAUS6P2-201ENST00000433254 2404 ntBASIC2.26□□□□□ -2.05
LITAFQ99732 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
LITAFQ99732 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.25□□□□□ -2.05
LITAFQ99732 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LITAFQ99732 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LITAFQ99732 AC004944.1-201ENST00000517807 3059 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LITAFQ99732 Y_RNA.149-201ENST00000363558 117 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 Y_RNA.176-201ENST00000363815 109 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 RNU4-9P-201ENST00000364951 139 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 RNU6-1286P-201ENST00000383871 107 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 RNU6-26P-201ENST00000383985 107 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LITAFQ99732 MIR1178-201ENST00000408396 91 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 MIR1252-201ENST00000408861 65 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 Y_RNA.592-201ENST00000410274 109 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 RNU6-1077P-201ENST00000410506 102 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 RNU2-49P-201ENST00000410666 184 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 AL356095.1-201ENST00000417217 199 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 AL591419.1-201ENST00000427423 339 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 Z82188.1-201ENST00000436709 154 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.25□□□□□ -2.05
LITAFQ99732 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.25□□□□□ -2.05
LITAFQ99732 H2AFZP6-201ENST00000444403 394 ntBASIC2.25□□□□□ -2.05
LITAFQ99732 AC012308.1-201ENST00000451232 178 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms