Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
COL12A1Q99715 FTX_3.1-201ENST00000610451 147 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 AC103705.1-201ENST00000619013 241 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 RNU6-263P-201ENST00000363811 107 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 RNU6-110P-201ENST00000384508 104 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 MIR518D-201ENST00000385014 87 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 MIR1267-201ENST00000408723 78 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 MTND4P11-201ENST00000417020 1058 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 AL449283.1-202ENST00000418249 604 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL12A1Q99715 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.1□□□□□ -2.43
COL12A1Q99715 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
COL12A1Q99715 MRPL42P4-201ENST00000453267 443 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.1□□□□□ -2.43
COL12A1Q99715 PDCD5P2-201ENST00000507570 312 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 MTATP6P9-201ENST00000515039 680 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL12A1Q99715 AP001330.4-201ENST00000604350 154 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 AC092354.1-201ENST00000606057 376 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
COL12A1Q99715 AC091912.2-201ENST00000624798 167 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
COL12A1Q99715 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL12A1Q99715 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.11□□□□□ -2.43
COL12A1Q99715 DDX3P2-201ENST00000446138 111 ntBASIC-0.11□□□□□ -2.43
COL12A1Q99715 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL12A1Q99715 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL12A1Q99715 AC093648.1-201ENST00000623546 606 ntBASIC-0.11□□□□□ -2.43
COL12A1Q99715 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL12A1Q99715 RNA5SP391-201ENST00000363456 119 ntBASIC-0.11□□□□□ -2.43
COL12A1Q99715 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL12A1Q99715 AC010900.2-201ENST00000604508 210 ntBASIC-0.11□□□□□ -2.43
COL12A1Q99715 AL133370.2-201ENST00000619934 439 ntBASIC-0.11□□□□□ -2.43
COL12A1Q99715 AC008443.7-201ENST00000622195 246 ntBASIC-0.11□□□□□ -2.43
COL12A1Q99715 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.11□□□□□ -2.43
COL12A1Q99715 SNORD114-9-201ENST00000364370 72 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 MIR29C-201ENST00000385231 88 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 MIR325-201ENST00000385260 98 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 RAP1BP3-201ENST00000407180 549 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 MTCO3P12-201ENST00000416718 547 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL12A1Q99715 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
COL12A1Q99715 LARP1BP2-201ENST00000486594 519 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL12A1Q99715 RMST_7.1-201ENST00000621935 268 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
COL12A1Q99715 OR5T3-201ENST00000303059 1023 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 CALM2P3-201ENST00000400429 449 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 RN7SKP266-201ENST00000410232 287 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 RNU6-735P-201ENST00000410612 107 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL12A1Q99715 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL12A1Q99715 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC-0.12□□□□□ -2.43
COL12A1Q99715 AC010631.1-201ENST00000474150 156 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 RNA5SP255-201ENST00000516370 107 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL12A1Q99715 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL12A1Q99715 AC004009.2-201ENST00000623016 728 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 RNA5SP275-201ENST00000363936 118 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 AC006548.1-201ENST00000427470 102 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL12A1Q99715 SCARNA18-201ENST00000459004 134 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 RN7SKP88-201ENST00000516847 250 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 HSPA8P13-201ENST00000523715 472 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 AC090888.2-201ENST00000559765 1144 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL12A1Q99715 7SK.8-201ENST00000612110 250 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 7SK.11-201ENST00000615477 250 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
COL12A1Q99715 7SK.13-201ENST00000622040 250 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 CR381572.1-201ENST00000625098 102 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 AC019226.1-201ENST00000625666 515 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 MIR1295B-201ENST00000636144 60 ntBASIC-0.12□□□□□ -2.43
COL12A1Q99715 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 SNORA1.1-201ENST00000364671 133 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 MIR561-201ENST00000385216 97 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL12A1Q99715 ELOCP11-201ENST00000436690 332 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 ELOCP16-201ENST00000444494 332 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL12A1Q99715 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL12A1Q99715 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 AC105029.1-201ENST00000520250 669 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 AP002453.2-201ENST00000533503 320 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL12A1Q99715 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.13□□□□□ -2.43
COL12A1Q99715 Z98751.3-201ENST00000604447 521 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 AC010738.1-201ENST00000604970 987 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 SNORD114-5-201ENST00000362928 70 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 MTCO2P12-201ENST00000427426 682 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL12A1Q99715 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.13□□□□□ -2.43
COL12A1Q99715 AC023194.1-201ENST00000493084 308 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms