Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC105129.3-201ENST00000605455 485 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 AP000238.1-201ENST00000608759 426 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 AC068057.2-201ENST00000624047 895 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 MIR4320-201ENST00000636981 65 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 RNU6-414P-201ENST00000363705 104 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 RNU6-532P-201ENST00000384318 107 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 MIR320B1-201ENST00000390209 79 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 SNORA12.1-201ENST00000390873 148 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 CALM2P3-201ENST00000400429 449 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 AL591034.2-201ENST00000402839 359 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 LARP7P4-201ENST00000481075 878 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 AC022523.2-201ENST00000561045 150 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 AC026271.5-201ENST00000577873 130 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.19□□□□□ -2.44
SPENQ96T58 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.19□□□□□ -2.44
SPENQ96T58 AC022432.1-201ENST00000595739 310 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 AC112220.3-201ENST00000605502 502 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 AC097372.4-201ENST00000625025 466 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 AC245060.5-201ENST00000610778 3293 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 AC134026.1-201ENST00000623249 2239 ntBASIC-0.19□□□□□ -2.44
SPENQ96T58 SNORA36.1-201ENST00000363424 132 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 MTND4P20-201ENST00000424125 869 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 AC092573.2-201ENST00000434546 243 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 AL353691.1-201ENST00000451332 387 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.2□□□□□ -2.44
SPENQ96T58 AC104164.3-201ENST00000467363 1258 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.2□□□□□ -2.44
SPENQ96T58 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.2□□□□□ -2.44
SPENQ96T58 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.2□□□□□ -2.44
SPENQ96T58 AC008121.1-201ENST00000603244 268 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.2□□□□□ -2.44
SPENQ96T58 MIR587-201ENST00000384845 96 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 RPS3AP1-201ENST00000413190 320 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 SNORA40.12-201ENST00000516329 111 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC-0.2□□□□□ -2.44
SPENQ96T58 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.2□□□□□ -2.44
SPENQ96T58 AC087685.1-201ENST00000587507 141 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.2□□□□□ -2.44
SPENQ96T58 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 MTCO3P12-201ENST00000416718 547 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 MTCO2P12-201ENST00000427426 682 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.2□□□□□ -2.44
SPENQ96T58 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.2□□□□□ -2.44
SPENQ96T58 PNPLA4P1-201ENST00000458328 305 ntBASIC-0.2□□□□□ -2.44
SPENQ96T58 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-0.2□□□□□ -2.44
SPENQ96T58 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
SPENQ96T58 RNA5SP327-201ENST00000362494 101 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 SNORD14D-201ENST00000384390 87 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 RN7SKP266-201ENST00000410232 287 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 RNU4-63P-201ENST00000411313 118 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.21□□□□□ -2.44
SPENQ96T58 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC-0.21□□□□□ -2.44
SPENQ96T58 FCF1P6-201ENST00000456841 595 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.21□□□□□ -2.44
SPENQ96T58 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
SPENQ96T58 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 RNU6-160P-201ENST00000384591 107 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 MIR644A-201ENST00000385262 94 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 RNU6-360P-201ENST00000390944 104 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.21□□□□□ -2.44
SPENQ96T58 MTCO3P5-201ENST00000433620 714 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.21□□□□□ -2.44
SPENQ96T58 HMGN1P13-201ENST00000505795 138 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC-0.21□□□□□ -2.44
SPENQ96T58 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.21□□□□□ -2.44
SPENQ96T58 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.21□□□□□ -2.44
SPENQ96T58 MIR3681-201ENST00000580089 72 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.21□□□□□ -2.44
SPENQ96T58 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
SPENQ96T58 RNU6-575P-201ENST00000411326 105 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 RPL30P1-201ENST00000488676 339 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.22□□□□□ -2.44
SPENQ96T58 AC105148.1-201ENST00000604961 409 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 AC004832.4-201ENST00000608952 331 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 MIR302D-201ENST00000362275 68 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 PDCD5P2-201ENST00000507570 312 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 AL713998.2-201ENST00000604538 1198 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 AL009028.1-201ENST00000604895 802 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 AC009033.1-201ENST00000624279 431 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.22□□□□□ -2.44
SPENQ96T58 MIRLET7D-201ENST00000362263 87 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 RNU2-21P-201ENST00000410368 188 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.22□□□□□ -2.44
SPENQ96T58 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.22□□□□□ -2.44
SPENQ96T58 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
SPENQ96T58 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.22□□□□□ -2.44
SPENQ96T58 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.22□□□□□ -2.44
SPENQ96T58 SPINT5P-201ENST00000448174 155 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.22□□□□□ -2.44
SPENQ96T58 RNU2-12P-201ENST00000517216 168 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 AC087481.2-201ENST00000565492 330 ntBASIC-0.22□□□□□ -2.44
SPENQ96T58 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.22□□□□□ -2.44
SPENQ96T58 BX664727.1-201ENST00000416024 466 ntBASIC-0.23□□□□□ -2.45
SPENQ96T58 AC104651.1-201ENST00000427559 735 ntBASIC-0.23□□□□□ -2.45
SPENQ96T58 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms