Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AP002392.1-201ENST00000537692 208 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR3186-201ENST00000577404 85 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR5692A1-201ENST00000580523 69 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR411-201ENST00000362239 96 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-595P-201ENST00000363944 107 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.199-201ENST00000364014 102 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-47P-201ENST00000383866 107 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-48P-201ENST00000384161 107 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.534-201ENST00000384599 112 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 RN7SKP53-201ENST00000411337 315 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 AC007098.1-201ENST00000420122 367 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 AL592045.1-201ENST00000429867 352 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 AC098831.1-201ENST00000440661 216 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 PRDX3P3-201ENST00000447765 522 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 snoU109.4-201ENST00000458953 143 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 RPL37P6-201ENST00000460682 294 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 AC034236.1-201ENST00000469891 373 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 AC022493.1-201ENST00000492984 337 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 AC008716.1-201ENST00000511084 513 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 RN7SKP258-201ENST00000517151 304 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 AC103783.1-201ENST00000520506 373 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR548AC-201ENST00000585049 88 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 AC024220.1-201ENST00000603675 484 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 AC011476.5-201ENST00000615594 130 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 ZNF299P-201ENST00000406845 1804 ntBASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.67□□□□□ -1.82
CDK5RAP1Q96SZ6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RPL9P7-201ENST00000330965 580 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-600P-201ENST00000362524 99 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-37P-201ENST00000362692 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-11P-201ENST00000364234 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNA5SP42-201ENST00000364278 115 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-7-201ENST00000364784 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-8-201ENST00000365467 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.358-201ENST00000365491 99 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-25P-201ENST00000383873 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-1-201ENST00000383898 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-36P-201ENST00000384172 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-4P-201ENST00000384205 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-5P-201ENST00000384238 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-3P-201ENST00000384314 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-16P-201ENST00000384385 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-15P-201ENST00000384534 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-2-201ENST00000384627 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-29P-201ENST00000384637 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-9-201ENST00000384776 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR183-201ENST00000384958 110 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-700P-201ENST00000391043 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AL591034.2-201ENST00000402839 359 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNA5SP56-201ENST00000410277 118 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNA5SP44-201ENST00000410446 133 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 CRYBB2P1-203ENST00000415709 538 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 MTND3P9-201ENST00000429526 346 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 VDAC1P3-201ENST00000434069 851 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AL513043.1-201ENST00000439124 535 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 PRSS3P4-201ENST00000453323 162 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RPL9P9-202ENST00000466501 579 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AL049830.2-201ENST00000480072 201 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AC087190.1-201ENST00000484462 480 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AC107032.1-201ENST00000485945 480 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-911P-201ENST00000516523 104 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 SNORA70.18-201ENST00000516696 98 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 MTND5P41-201ENST00000517498 206 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 SYF2P1-201ENST00000550658 413 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AC126177.3-201ENST00000551839 688 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR3922-201ENST00000585192 84 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 AC073657.2-201ENST00000605661 303 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-6P-201ENST00000606623 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 BX284668.6-201ENST00000606899 438 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 Z99571.1-201ENST00000636677 394 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 U6.105-201ENST00000637379 88 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms